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11-5569-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 607760 [Map]; Strand: w
      • AT2G02300.1 - [+] show detail - phloem protein 2-B5
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5569-1 - 5-prime edge
    CTTATGATAG CTAAGCAATC GTCTGGCAAA TCATCGAAAG ATGCCGAAGT 
    ACCATTGATA AATTCAGTGA GAATCTCCCA ACAACCACAA AATTCTGCGC
    CTTTCCCTCT TGTGTCAACG CCATGTTTTT GGCCCATGCG ATAGTTTTCT
    TCCGCTGCAA GCTGAGACTT TCAAGAAATA GTCTCAGCTG CTAAATGTTT
    TAAAAAGAAA GACTCGTTGT AATGTCGTCC ACTCGTTAAC GAAACTATCA
    TTCTTTGCGT CAGTGTGCAC GTTTGATGTT CGTTTTGGTA TTTGGAAATA
    TTCTAACTAA CAAATCATGT TATAAAATTT AGTCAGATTA GTATATAATT
    AAGATCATCG TGATATAAAT TAATTATCTA TATAGCCGAC TTCTCATGTC
    TATCTAATAA ATTCGATCTA TAATAAAGTC CATAAATGAT ATATGAACGT
    ACAAACTTTG ACTTTTTTAC GAATTTTGTT CACTTGAACA TTAACTTTTA
    ACAAAATAAA GAAAAAAGAG AGAATGATGA ACAATTGAAC ATCATAATCA
    AAAACCCAAA TCCAGTATTG TTACAAGGTT TCCACGATAT ACAACAAATT
    TATAACTTAC GTANACATTA TAGTCATACA AAAACATACC CAGAATTTAC
    ATCCAAAAAC TTGATTACCA CCAACTTNTN AATNTANCN
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 607686 [Map]; Strand: w
      • AT2G02300.1 - [+] show detail - phloem protein 2-B5
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5569-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    CTCTTTTACA AGTACTCCAC GGGACGCGTT CCTTGCTGCT TTGGTTTCGA
    NNAGCT

AT2G02300.1

Model type
Protein coding
Short Description
phloem protein 2-B5
Computational Description
phloem protein 2-B5 (PP2-B5); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B6 (TAIR:AT2G02310.1); Has 491 Blast hits to 482 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 491; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR