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11-5582-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14201858 [Map]; Strand: w
      • AT2G33530.1 - [+] show detail - serine carboxypeptidase-like 46
        Distance: -1298; Region: intergenic
      • AT2G33540.1 - [+] show detail - C-terminal domain phosphatase-like 3
        Distance: 1647; Region: intergenic
    Flanking Genome Sequence: 11-5582-1 - 3-prime edge 
    AGTTATTGGA AAATGGAAGA TCAGAGACGA GAGGTGAGAA GGTGGGGATG 
    GGCCAGTAAC ACTCTTTTAG CCAACCTATG GCTATAAAGG CAAAAGTTGT 
    TTTCAGTTTC AGACCAAATT GAATTTGTCT TTTACCCATT TCTACCTCTC 
    TATTTCATTT CCCTAACAAC TTAAATTGTT ATAATTCATT TTTCTATGGT 
    CAAGAAAGAT AATGCATTTA GGCTGTGAAT GGAGCATGCG GAGCAGGAGG 
    ATC

AT2G33530.1

Model type
Protein coding
Short Description
serine carboxypeptidase-like 46
Computational Description
serine carboxypeptidase-like 46 (scpl46); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 45 (TAIR:AT1G28110.2); Has 3657 Blast hits to 3595 proteins in 428 species: Archae - 0; Bacteria - 306; Metazoa - 635; Fungi - 851; Plants - 1456; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G33540.1

Model type
Protein coding
Short Description
C-terminal domain phosphatase-like 3
Computational Description
C-terminal domain phosphatase-like 3 (CPL3); FUNCTIONS IN: phosphoprotein phosphatase activity, CTD phosphatase activity; INVOLVED IN: response to salt stress; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: FCP1-like phosphatase, phosphatase domain (InterPro:IPR011947), NLI interacting factor (InterPro:IPR004274), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 4 (TAIR:AT5G58003.1); Has 1686 Blast hits to 1267 proteins in 263 species: Archae - 0; Bacteria - 131; Metazoa - 483; Fungi - 269; Plants - 334; Viruses - 2; Other Eukaryotes - 467 (source: NCBI BLink).
Link
InterPro Scan - TAIR