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11-5640-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1231449 [Map]; Strand: c
      • AT1G04520.1 - [+] show detail - plasmodesmata-located protein 2
        Distance: -129; Region: promoter
    Flanking Genome Sequence: 11-5640-1 - 5-prime edge 
    TTCAGTTCTG AAACTGTACA ATGTTTGATT TACTGCAGCA AATTACAATA 
    AATATTTATT GATTGAAAGA TTTTAATAAG AGTTTATTTG TTGTTTAGCT 
    TCCTTTTTAC CACCTACTAG CTACTAGTGA CCTTTGAATC TTATTCCAAA 
    TAAGTATGTC TCTAATCTAG TTTAAAGTCT AATCTTGTTT TTAAAGTCAT 
    TTAGTGACTT ACTTTGTGTA ACATTCTGGT TTAGTAGTTG GTTACTTTGG 
    AAATTGGGTT TAGAGAAAGA TACAAACTTT CTTGCACTTA CTTGATTGTT 
    GATACCAAAA ACATGTTTAG GAAATTTAAC CAATAACGGA ATTACTAAAG 
    ATGAGCTATA AATAGGAAAA AAAAAAAAAA AAAAGGGNCC NAAAAAAAAA 
    AAAANNGGGG GGNNNGNAAA NNNNNTTTTN NNTNGGGGGG GGNANGGNAA 
    AAANNGAAAA GGGGNNTTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1231565 [Map]; Strand: c
      • AT1G04520.1 - [+] show detail - plasmodesmata-located protein 2
        Distance: -13; Region: promoter
    Flanking Genome Sequence: 11-5640-1 - 3-prime edge 
    GAACTGAATG GCTCAGAAGC GTTAAAAGGA AAAAGAGACT CTCTCTCTCT 
    CTCTCCCCTA ATCTCCTCTC ACATGGTCAT CAAAAGCCAA AGCCAAAGCC 
    AAAAAAAACA AAGAACCCAG AAACCTAGAA GACAGAAACA AAAATCAAAG 
    CT

AT1G04520.1

Model type
Protein coding
Short Description
plasmodesmata-located protein 2
Computational Description
plasmodesmata-located protein 2 (PDLP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, plasmodesmata-mediated intercellular transport; LOCATED IN: plasmodesma; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 3 (TAIR:AT2G33330.1); Has 1091 Blast hits to 1028 proteins in 65 species: Archae - 0; Bacteria - 64; Metazoa - 5; Fungi - 13; Plants - 1007; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR