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11-5707-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21485480 [Map]; Strand: c
      • AT5G53000.1 - [+] show detail - 2A phosphatase associated protein of 46 kD
        Distance: 0; Region: exon9 (3UTR)
    Flanking Genome Sequence: 11-5707-1 - 5-prime edge 
    CATCTTTCTA CTCTTAAGCC TTAGACTGTT ACAGATTTTG GATTCACTTT 
    CATTTTCGTT GGAAATATTA TTTTTAAATA CGCCGACTAC TAAAGATACA 
    ATGTATATAT CTAGTAAAAT ACTAACNGTG TGACTGGATC TGATACCATC 
    TTTCGTTGTC CTCTATTATT GTGTAAGTGT GTAACCCACG TTCAATCACA 
    GCACCATTTA TGGAATCAAA CAGCAAAAGA GAAGCGAGAA AAAAGAGAGA 
    GAGATAATAA CAACACACAT TTTGCTTGTG AATGATTTAA CTTCCAAAGT 
    ACAATGAACA ACATCACTAA CAATGTAAAC CAGGATNNAN CCTATACCCT 
    AGTTTCCTCC TGGAAACAAC ACTTTTTGTG ACTTTTAAAA ATCAAAGAAG 
    ATGAAAAAAA AAGTTGACAA GAACAGAGAG ATAACAAANG GGATCAGATT 
    TGATCCAAAA AAACGGATAC CCANAAAAAA NAANATGTCA AATGATCAAA 
    TTTTGATGCG GATTCAAAGA ATATGAATTT GGAGATGTAC ACAGATGATG 
    ATAACTTTTA CCCTTGAATG CATTGAAAAC CTTCACAAAT CCAAAGCCAG 
    ATTCCAAACA AAACAGCNCA GATGCANAAA TCAAACATNA ACACAACCCA 
    AACNTGTTTN TTCCAAATCT GTTNCGCCTT TNGNCTATGA AGAAGATCAC 
    TCN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21485596 [Map]; Strand: c
      • AT5G53000.1 - [+] show detail - 2A phosphatase associated protein of 46 kD
        Distance: 0; Region: exon9 (3UTR)
    Flanking Genome Sequence: 11-5707-1 - 3-prime edge 
    GAAAGATGAT TACATTACAG ACATTATAAG TGAACGAAGA GGTTTTGGAA 
    ATAAGAAACA AAAGAGAGGG AGAAAGTGTT AAATAATGTG TGTCTCGGTC 
    TCTAGTCTCA GCCACAAGGT GTGAGTTTCT TGTTACCTGC ACCGCGAGGA 
    TTATCATCCT TCCAATCATC GAAAGCTCTA GCTTTCATCA CAGCTTCTTC 
    GTCTTCATCA TCATCTTCCT CGTCTTCTTC TTTTCTTCTT AGAGGTTTAT 
    CATTGTACCA TGAGGTGGTT GCTTCTTCAA TGGCTTTTTT CGTCTGCTCT 
    TGCCAATCAT TCATTATGTT CATCTCTGCT AACCCAGCAT CCTCTATGCA 
    CATTGTTGGC ATCCTACAAA ACCCAAGTTT AATCACTATT TTTAAATCGC 
    AAAAAGGATT AAGATTTTGT AATGAGTATT ATTTTGTGTT TACCTGTGAC 
    CTGGTTGGAA GACCTGAGCT ATCATTCTTT CTCTCTCGGT AGAGAGTGGT 
    CCACCCACGA TGCTTGCTGG ACCGAATATA AGAGGTTGGT TCTTGTGTTC 
    GTGACCCTGT GATACCGAAG CTCTTCCTTC TAACACATCT TGTGCAAATG 
    TGGCACAAGT GATTGGTTGT GCCGGTTTAA AGTACTGTAT CCTTGCAGCA 
    GCGTCTCTGT GCCAGGTTTC AGCTTTCTTT GTACGATCAT CAANAGCATC 
    CCGAGAAAAT CCACCCTN

AT5G53000.1

Model type
Protein coding
Short Description
2A phosphatase associated protein of 46 kD
Curator Summary
PP2A-associated protein with a possible function in the chilling response
Computational Description
2A phosphatase associated protein of 46 kD (TAP46); CONTAINS InterPro DOMAIN/s: TAP42-like protein (InterPro:IPR007304); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR