1. Home
  2. Mutant Lines
  3. 11-5786-1

11-5786-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17673895 [Map]; Strand: c
      • AT4G37610.1 - [+] show detail - BTB and TAZ domain protein 5
        Distance: -1542; Region: intergenic
      • AT4G37620.1 - [+] show detail - transposable element gene
        Distance: 296; Region: intergenic
    Flanking Genome Sequence: 11-5786-1 - 5-prime edge 
    TTCGATAGTN ATTTATTCCA CGGACACAGA AATAAATTAG TTTTTACTTT 
    TAGTGATGGA GCTGTTATAG GCATGATTGT AGTACTTGTT AATAATTTCC 
    CCTAATTTGT CATATTAGCA ATCGNAAAAG AGAAAGTGCC TCATGAACTA 
    TATGAAGAGG TCANCGTGAG CGTGCCANCA ACTTGAGAGA TTCGTGACCA 
    AGTATCTATC AAAAGAGCTC TATTATTTTT TGAGGCTGAG TCAGCGACTA 
    ATAATTNCGT TATTAAATTA CCGCTTTTTC ATTTGTTTAA TCATACTTTT 
    CGTATACTCT ATGGTTAAAT CGTTAATTTG TCGCGAAGAG GCAATGTGAC 
    GTTTTACACA ACATAATCCA ACAAATGAAA CAAAAAGATA TTACCATAAC 
    CTATTATTAC CTATCACAAT CTTACCTAAT CTTTGTCGGN CTTTGAAATG 
    GTACATTTGC CCATCGCATA AAGGGGTATG GTGCGACTCC GGCTCGTAGC 
    AGTTNCGTGG GTTGATGAAT GGTTGTTTCA AAACAATAAA TGTTTNAACT 
    NGGACGAANG ATAAATAATT NCATGNANAA CGAAACCATT NCATGACNTA 
    TCATNATTNT CATTTTTAAN ANTTTAANCA TGGACGANCT NAACATNANA 
    CACTATNTAA AATNCCCNGT TCNAAGTATT TGGAATTTAN AAAANTAGCN 
    AAAATGGAAT ACTNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17674478 [Map]; Strand: c
      • AT4G37620.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-5786-1 - 3-prime edge 
    CTATCGAATA TGTCTAAACA CGTCAACAAA TTGATTGTGT TTTGATTTTA 
    AAACGTGTAT GTTCAACGTG GTCTATTAAA CAACTGACAT TTTATTCACT 
    ATTTAGCTAA TTTATCTATC ATCATATCAA TACTTTGTAG AGTTGTCGTT 
    GTAGAAAATT AATGAATTGT ATACACTTTG TTTGTTCATA TATTTTGGAG 
    TAACAATGTC AATGAGTACC CTCTAGCATT TTTTATTTTT TTTTGGGCAA 
    ACTCTAGCAT TGATTGATAA AGAAAAACAG ATTGTTATAG CATGGACCTC 
    AGTTATGTAN ACCGGCTACA TTGGCTACAT TATTACACAT GGGTCACTCT 
    CACTTATATA TTGGGCCTGT ANAAACATTT TGATAAANAT GGGTCTTACC 
    TTATAATAAG TTTTAGGCCC ATTATTAGTA ATATCCCGAA ATGCTTAACA 
    GTTAACACTC ACTATTACAT CTACTTCTCT TGTGGANAAT GGAGATAGTC 
    GCATACTATA GCATTACAAA ATTTAATTTT ATCTACGAAC TTTCGCAATT 
    TTCTTTTAAA TCTATAGCAA CGAACTCTTT TTTTAACAAA AATTGAGTAA 
    AAAAATTATG TATCTGATTT CGTGTCACTG NAATAATTAN ATGTTATAAA 
    TTTTGGATGA TTTTTCTGTT TTTTTTTTGN CAAAATAAAA NCANTTTTNT 
    TTGAATGCAN TTAAAACAAA T

AT4G37610.1

Model type
Protein coding
Short Description
BTB and TAZ domain protein 5
Curator Summary
BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.
Computational Description
BTB and TAZ domain protein 5 (BT5); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 4 (TAIR:AT5G67480.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37620.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
similar to RNase H domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G09490.1); similar to 80C09_17 [Brassica rapa subsp. pekinensis] (GB:AAZ41828.1); contains InterPro domain Ribonuclease H; (InterPro:IPR002156); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337)
Link
InterPro Scan - TAIR