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11-5844-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 954322 [Map]; Strand: c
      • AT3G03776.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-5844-1 - 5-prime edge 
    CATGAATGGT CCTAATGGTT TCTCAAACTA TCATCTGCCG GATTATTGGA 
    TGAATCAACC TCAACTATAC AATCCCACTA TATGTCCCCC ACCACCACCA 
    CCGTATCCAC NGTCAGGTCC ATCCGCAGCC ACCAGCACCA CCACCGTACA 
    AATTCCATCA GAAAGAACCG GTGGCTAAGA GTTTCCCGCC TACACCAGCT 
    CCGCCTAAAA ACTTTACGAT GGGAGATTTG CAACTATGCC GGATAATGTG 
    AAAACTTTTA GTGTTGCACG ATGTTGTCCT TTTTTCATTC GTTGATGTCT 
    GTTTGTGGAT CATGAGAAAG ATTTATGTTT ATTAAGGATC TTATTATGAT 
    TTCAAACAAA ATATTCCAAA CTGGATATTT GAGATTCTCC TAAAGTAACA 
    CACGCAGACT TCTCANAAAA AGTTTTGTTT TGTTATACAG TCTAGGATTC 
    TTGTTGTATC ANAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 954438 [Map]; Strand: c
      • AT3G03776.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-5844-1 - 3-prime edge 
    CATTCATGTA TGGCGGATGA TAGTTTGAGA AACCATCAGG AACATTTATG 
    TGTCCCGACG CATAACGTTG TTCCATCAAA TGGTCTTTCC GATTTTCCGG 
    CTGCTTACTC TGTCCGTTAT TGCTCCATAA TATAACCGCT TTTTTGCCTG 
    CTTTTGTAAT CTTTTCAAGT ATTATTTGTG GGTCGACTTT TCCCGATAGA 
    TATACNTGTT TTGCTTTGCT TGTCGATCAT GAAACTCACA TCTGTAAACA 
    AACAAAAGAG AAGGGAAGAA TTATGAAAAT ATATTCTTGC ATTTCATATT 
    AAAAAGAGTC CAATATTAAC AAACTGGCTA CAATAACGAT TTGTTCGATA 
    AAGCGAAGAG ATTGAAACGG AAACATGTTT ATAGTACTAT CATCTCTAGA 
    CTACACAAAA CTATCCGAAA GATTAATTCG ATGGTCATGG TTATATTCCG 
    GAGATGATAC ACAACAATTG TTTTAAATAA TTGGGTTTTG TAAGTGCAAA 
    CGATACACAT AAGTTAAATC TTGAAAATTA TGTATGTATA AATACAAAAG 
    AAAAACATTA TGCATTCAGA AAAAGAAGTG AAGACAAAGT AAGAAATGAA 
    ATGATAAAAT TAAGATAATT AAACGAGAAA AGTGATAGAT TAAGAAACCA 
    TTAATTGTCT TGAGTAATTT TTCCAAGGAT TTCTTCCATC CCGGCGTAGG 
    AG

AT3G03776.1

Model type
Protein coding
Short Description
hydroxyproline-rich glycoprotein family protein
Computational Description
hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 915 Blast hits to 647 proteins in 148 species: Archae - 2; Bacteria - 101; Metazoa - 200; Fungi - 102; Plants - 326; Viruses - 60; Other Eukaryotes - 124 (source: NCBI BLink).
Link
InterPro Scan - TAIR