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11-5845-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1183451 [Map]; Strand: w
      • AT1G04390.1 - [+] show detail - BTB/POZ domain-containing protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-5845-1 - 5-prime edge 
    CATCTCAATA TCAGTACACT TCCACTTCTT CTCTTTCTCA TCACAAACCC 
    TAACAAGCCA ACAACCAAAA TTTTCTCAGG AAACAAATTC AAAAAGGGAA 
    AACAGCAAAT TAAACATCGA GAGATTGAGA GTAAAGAGCA AAAAGAGGAC 
    CTGAAGCCAA GATTGAGAGC GTGATAAAGA CGGTGGTGAA GAGTATTGAT 
    GTGGGCAGTG GTGTTTCCTC CCTTTGACGA CGCCATATCT GTCGCCGGAG 
    TTTTCGTTCT GACTGAAAAT TGACCGGTGG ATTTGATACA ACGGAGTGAT 
    TGATACACGA CACAGAGAGA CCGTCCTTTG ATTTTTTGAT AATGGGCCTT 
    TAAATAAGGC TTTCTCTTCC AAACTAATTC GCATATTTCT ATTCCCAAAC 
    AATTATAAAA TTAATAAACC CGAAATAATT TTTAAAAAAT CATCACGCAA 
    TTCAAAAAAT GTTTTCCTTA AAAAAATTGT AGTGTAAACT GAAATTTATC 
    AGCATTATTA TGCACTCATT TCCTTATGAA TAAAATCAGT AAAAGAAATT 
    TAGAGTTAAA AGACACACAT TCACATATCT ATGTTTGAAC ATTATTTAGC 
    TCGTTGACTA GCTTGAAGAA AAAGAGACAA CGACCCACGT TTATGTCTTT 
    AATCTTTATA ACAGGAGATA CATCAAACCG GAGGGAGAAN AAGTTGTTTG 
    A

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1183374 [Map]; Strand: w
      • AT1G04390.1 - [+] show detail - BTB/POZ domain-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-5845-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AGACATGTCG TGAAGTCGAT TTCAGCTTTC CTTGATTGTT TTTCTCGTGC 
    AACAGCTAAC AATCGTCTTA TCAAGGTCTG TTTCCATCTC TAACTCGTTT 
    AAATTTCTTA ACTTTTTTTG TTGAAATTGT CTTTTTTGCT TGATTCCAAA 
    GTTTTTTTTT TTTTTTTGGG GGGGCNANNN ANAAAATTTT NAANNANCCN 
    GGGGCTTGGG GNTTTTTTTN GGGGNNAAAA ANNAAACCGG GGGGGGGNNG 
    GGCCCCNAAG GNNNTNNNAN GGGGNANCNN NTTGGNCCCC CCTTTNNTTN 
    GGNNNAAANN TTTTNGGNAN NNGGGGGGGN TTTNNNNNCC NTNNTNTNNN 
    NGAAAAAAAT NANNGNTTNC CNNCCCCNGG CCCNNNNTTT NAANCCCTTT 
    TTTNGGNACC GGNAAAAAAN CNNGGNAAAA AAANGGGGGN AAAATTTNAA 
    NGGNNAAAAA ACNGGGGGNN CNNGGGGGGG GAAATTGNNA AANNTTTNNN 
    NGGGGNNNTT NCNCNGGGNA AGGGTCNAAA AAAAGGGNTT CCTTTGNAAA 
    NAAATTTNGN NAAAGGGNCC CCNNNNNNGG NTTNNNNNNG GAAANNNCCC 
    CCCCTTGGGG GGGNNTTNGA AAAANNNNNN NNAANCCCNN NNNGGGNNNN 
    NCNNNNNNAA NNTNNAAANC CNANNNCCCN NGGGGGCNNA ANNNNANNNN 
    NNNNAAATN

AT1G04390.1

Model type
Protein coding
Short Description
BTB/POZ domain-containing protein
Computational Description
BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); Has 143 Blast hits to 130 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR