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Mutant Lines
11-5922-1

11-5922-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 568664 [Map]; Strand: c
- AT1G02650.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -40; Region: promoter

CTGTTACGTT TCCACCAAGG ATGAATCGCC ATTGCAGTAG TTTTCTGGTT 
CTCAAATTCT CCGGAAAAGC AATGAGAAGA CGAAGTCTCT GTTTTTTTCC 
TTAATACACA GTGAATTTAA AGGTGAGAGA GATAGGTGGG AAACTGGAAA 
GATGATAGAG AGTTGAAAAT CATGTGAAGT CAATCATCTT AAATACGAGA 
GGGCTTTTGA TAACAGAGGT AGATAAAAGA AAGCTAGACT GACGGATTTG 
CCCTTGAAAG CT

3 prime edge [+] show sequence

Chromosome: 1; Position: 568744 [Map]; Strand: c
- AT1G02650.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron1 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAGT 
AAATACTTCA ACCCATAAAT CAAACTTTTG CTCTTAGGTT TATCGAAATA 
TATATCATCT TCAATGTGTA CAAAACTGTA TCTGATTCAG AAAGTGGACA 
AGTACATGAA GAATGCGAAG GATTTGATAA CCAGCCAAGA TCCAAACGAC 
ATCGTATCAG CTCTCAGTCT CTTGAATT

AT1G02650.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ with tetratricopeptide repeat (TAIR:AT4G02100.1); Has 193 Blast hits to 189 proteins in 47 species: Archae - 0; Bacteria - 2; Metazoa - 37; Fungi - 13; Plants - 127; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link: InterPro Scan - TAIR