Home
Mutant Lines
11-5924-1

11-5924-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 26526147 [Map]; Strand: w
  - AT5G66430.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
    Distance: 0; Region: intron2 (CDS)
Flanking Genome Sequence: 11-5924-1 - 5-prime edge
```
TGTATGCATT TGGAGGACTT GAAGTCGTTA TGTACACAGA CGAGGAATT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 26526073 [Map]; Strand: w
- AT5G66420.2 - [+] show detail - LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EX...
  Distance: -992; Region: promoter
- AT5G66430.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
  Distance: 0; Region: exon3 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
AGGCTTATTT AAATCAATTC CAAAGTGACT TTAAGTCATT TCTAGAAATG 
CGTTCTGAGG AGATGGTTTC TAATGGACGC ATGGTTCTCA CTTTCATCGG 
TAGAAAGACT CTCGATGATC CATTGCATAG AGATTGTTGT CACTTTTGGA 
CACTATTATC TACATCTCTA CGCGACCTAG TCTATGAGGT AACATATAAA 
AGTACCAAAT TTCGACATTT AAAAATTTAT CGGCTTTAAA GATTCAAACT 
TTTTTTTTGG TCAAACAAGA AAAGATTCAA ACTTTTTATG ATCCACAATA 
TAGGGTCTTG TGAGTGCGTC AAAGGTGGAC TCTTTCAACA TACCGTTTTA 
TGATCCGAGC AAAGAANAAG TGATGGAGAT GATTCGAAAC GAAGGCTCAT 
TCGANATCAA TGACTTGGAN ATTCATGGAT TTGAGCTTGG CCTAAGCAAC 
CATGACGAGG ACTACATGTT ACATTCACAA ATATCTAAAG CAGGGCAGAG 
GGAAGCCAAC TGTATAAGAG CGGTCAGCGA ATCAATGCTT GTAGCTGACT 
TCGGAGTAAA CATTATGGAC ACATTGTTTA ANAAATTTGC NTACCATGTG 
TCACAACATG CTAGCTGCAC GAACAAAACN ACTGTTACTC TAGTCGTTNC 
TTTGATACNA AAGTAATCTG TCAATGTAAA TTTTTNAAAT TTCATGTNGA 
NACTAGGAAA ATGTTTTTG

AT5G66420.2

Model type: Protein coding
Computational Description: LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 1232 Blast hits to 1230 proteins in 311 species: Archae - 18; Bacteria - 959; Metazoa - 1; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66430.1

Model type: Protein coding
Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR