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11-6002-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2675569 [Map]; Strand: c
      • AT1G08465.1 - [+] show detail - Plant-specific transcription factor YABBY family protein
        Distance: -244; Region: promoter
    Flanking Genome Sequence: 11-6002-1 - 5-prime edge 
    CCTATCACCA AATAAGTTAA TTTCAATTAC ATTTTTATAG GATAAGTAGT 
    AGGCTAGTAG CTCAATATAT AATCTTATTG TTACAGTCAT TTTACAATGA 
    ATAGTACTAG ATCATGAGAA TGTGTATTGT ATTTGTCTAG CAGATAAGAA 
    ATGAGATTAA CAGTTCGATT AATTTTTGTT TTTTCAAACA CATATCTGAA 
    AATGATACAT GGACTTTGTT AGCAGCAACA GTAAATTTAG TAAAACGATA 
    CAGTAGTTTG TGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2675685 [Map]; Strand: c
      • AT1G08465.1 - [+] show detail - Plant-specific transcription factor YABBY family protein
        Distance: -128; Region: promoter
    Flanking Genome Sequence: 11-6002-1 - 3-prime edge 
    GTGATAGGAC TATATATCTT AACTAAAGAT GAAAAAACAA TAAAAATAAC 
    AAAGGGAAAT CTTCACTTTA TTATGGAGTA ATAGAACTCT CTAATTATCT 
    AAGAAAAAAA AAANGCANGT CCCCGAAAAA TAAAAAAGAG GANCATNGTA 
    GTATAGNCCC CACTNGTCTN TNTTCGTCTC CAAATAANCC ACATTAGTCT 
    TTTCANATTT TTNGTNCNCT TCCTTCNTCC CCCACCCATC TNTCTCTCTC 
    TCTNATCCTT CCTNTTTNTT NTTNGCTGGC CCTTTTNTTT TTATTTTATN 
    CTCCCAAAAN NAAANAGTCC CTTNTTNGAT CTCNTGGGGA NAACNAAAAG 
    TTNCAANAAN ANAANCNTNT NTTNGAAGAN ANACCCCCCC CAAAAAAAAN 
    NGTNNGTAAA TTNCTNATCN GANCGNGTNN GCTNTGCCCN CNGNANNTTN 
    NGCCCCANNA TTTNAGNGGA AATCCCCCTN NCCTTTTTNT NTGGAAAATC 
    TTNCTCAAAA AAAANAGGGN NANTNGGGNC CTTNCTCNNA GCNAAACCCC 
    CTTTTNTNTA NCTTAAAAAA AANGGGTNTN NAAGATATNT NTTNTTTTCC 
    CTATNAAANN GGGGGGGGNA NAANNCNNNN NGGGGTNTGG CNGGAGAAAT 
    TNNGCNTCNA GNNCANAAAN NAACATTTTN TTTTNCNGGA ANAATTGNGG 
    GGNGAAANTT TNTCCCGGAG

AT1G08465.1

Model type
Protein coding
Short Description
Plant-specific transcription factor YABBY family protein
Curator Summary
Member of the YABBY family of Arabidopsis proteins involved in the abaxial cell fate specification in lateral organs
Computational Description
YABBY2 (YAB2); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 446 Blast hits to 444 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR