1. Home
  2. Mutant Lines
  3. 11-6008-1

11-6008-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 584066 [Map]; Strand: w
      • AT4G01420.1 - [+] show detail - calcineurin B-like protein 5
        Distance: -2548; Region: intergenic
      • AT4G01430.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: -1532; Region: intergenic
    Flanking Genome Sequence: 11-6008-1 - 5-prime edge 
    NTNGTGANTG AGNGAAAGCN ATCACANNGG NCNANGTAAA NAACGCCGNG 
    CTNGNCACCT AANAAANCGN GATGNTNTNC CTNGGATNNC TNNTATTNTG 
    GNGGNAACTA ATNAGTCACA GGANTGACAC ACGTTCTCTT NGATCTTTGG 
    GCAAAACCCT ACTAAGAAAA TTANTAGGGN TAAAACTAGA TATGGNGTAT 
    GAAAGCATTT TTTACTTTCA CCNATTTCTC CAAATTCAGG TATTNTTAAT 
    TTTAGTGTAG NGTTCATAGA AATATTTTTT CTCATAAGAA ANGAAACCGA 
    TTTAGAGTAA AAAGTAATTA AGCATATCAA ACAACTTCTA ACAGACGCAG 
    AATTTAAAAT ATAGCATTTT TGCGATTCCT AGNTCCGTTT TTTTTTNACT 
    TTTTNTAACA GGTTANTNGG ATNTTCACNC TGGCGGGNGG CAAACTAAAA 
    TATTGACTAT CCNGTTNAGG ACAAAATNNG NCTCTTATAT CTAGNAAAAN 
    GGNACTNGAA AAACTTCAAT NTCNGNNGGG GAGCATNTNA GCNAANAAAN 
    CTTNGNANAG NNGNAATTNT NTGGCCCTTT TTTNGGNNNG GNTAAAAANA 
    ATGGNNTGAG NNGNNNGGGC NNNGNNAAAA ANANCNNTGN NCNTGGNNGN 
    GANNGGANAA AAAAAANGGG ANNTNNNTCA NNNANNNTNN GTTNNNCNAA 
    AAAANNTNNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 583986 [Map]; Strand: w
      • AT4G01420.1 - [+] show detail - calcineurin B-like protein 5
        Distance: -2468; Region: intergenic
      • AT4G01430.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: -1612; Region: intergenic
    Flanking Genome Sequence: 11-6008-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GGCNCACNNT GGCTGCANTA TATCTAAATC ATTACGAATC TAAACGGNCG 
    GCCNTGCCTC GNAATNTAAA GCCGGTCGTA ATCTATAACC CATTACATTA 
    AAATCTCTGC GATACCGTCC AACGATTCTT AATTGTTTTA CTGCTATGGG 
    ATTTGAGAAG ATTGGGGCCT GGTAAGGGAG ATCAAAGATA CCGCAGCCTT 
    CTGGGCAGAT CCTAAAGGTA CTACTGTATT TGTTGAAAGA TTAAGAACAT 
    AGAAGAATCT GAAGCATTGA AGTAGAAGAA TCTCACGAGA AGAGGAAGAA 
    GCAAAACCAA CGTGGTATTG GTCCAGTAGT AAATCTTTGA GATAGAGGTG 
    ATGGGTTCGA TGCTTATTGG GATTTTTTCT CTAAATGACA TGAATTTAAC 
    TTCATGTGGA TCTCATCTCT GAAAAATATA AGACATTCGA ACTTGAATTT 
    CCAGATATTC AAAAAAAAAA AAAAANAACC AAAGTCGNCA ACAAATANGN 
    ATGTCGGNAT TTNGGNNTTG TTTGTTNGCC TGTCCNTNNC NACTGAAATC 
    AGGGACAATA ACAAAAAGTN GTNCATTTNT TTGTNGCTAA ATTCAAGNGT 
    TTGNGGNCNC TTNTTTGCAA NTNAGGGTTA AGNTNCCNN

AT4G01420.1

Model type
Protein coding
Short Description
calcineurin B-like protein 5
Curator Summary
Encodes calcineurin B-like protein 5 (CBL5). Overexpression confers tolerance to drought and salt stress.
Computational Description
calcineurin B-like protein 5 (CBL5); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to salt stress, response to water deprivation, N-terminal protein myristoylation, calcium-mediated signaling, response to osmotic stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, flower, leaf; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G24270.2); Has 5545 Blast hits to 5527 proteins in 657 species: Archae - 0; Bacteria - 7; Metazoa - 2787; Fungi - 925; Plants - 1302; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01430.1

Model type
Protein coding
Short Description
nodulin MtN21 /EamA-like transporter family protein
Computational Description
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G01070.1); Has 2489 Blast hits to 2481 proteins in 402 species: Archae - 14; Bacteria - 1085; Metazoa - 6; Fungi - 8; Plants - 1212; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink).
Link
InterPro Scan - TAIR