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Mutant Lines
11-6032-1

11-6032-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 3; Position: 22769848 [Map]; Strand: c
- AT3G61520.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)

GAGGCACCAT GGATTGAACA TGGCGGTTGT ATTCTTTATG GATATGGAAA 
AGGAAGGCGT GAAAGGGAAT GTGGTTACTT ATATGACATT GATTCATGCT 
TGTTGCAGCG TCAGTAATGT AGAGAAGGCT ATGTATTGGT ATGAAAAAAT 
GTTGGAAGCT GGTTGTTCTC CTGATGCAAA GATCTATTAT GCTTTGATCT 
CTGGATTGTG CCAAGTTAGA CGGGATCATG ACGCCATTAG AGTGGTGGAG 
AAACTGAAAG AAGGAGGGTT TTCTCTTGAC TTATTGGCTT ACAACATGCT 
TATTGGGTTG TTTTGTGATA AGAATAATAC AGAGAAAGTC TATGAGATGC 
TAACCGATAT GGAAAAAGAA GGGAAGAAAC CTGATTCCAT CACTTACAAC 
ACTCTGATTT CGTTTTTCGG TAAACACAAG GACTTCGAGA GTGTTGAGAG 
AATGATGGAG CAGATGAGAG AAGACGGGTT AGACCCGACT GTCACGACAT 
ATGGAGCGGT GATTGACGCT TATTGCTCAG TCGGCGAATT AGACGAAGCA 
TTGAAGCTCT TTAAGGACAT GGGTTTGCAC TCAAAGGTCA ATCCGAACAC 
TGTAATATAC AACATTCTCA TAAACGCATT TTCTAAGCTG GGGAATTTCG 
GGCAAGCGCT CTCTCTGAAA GANGAAATGA AGATGAAGAT GGTGAGACCT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 10333202 [Map]; Strand: c
  - AT5G28370.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
2. Chromosome: 5; Position: 10376283 [Map]; Strand: w
  - AT5G28460.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
3. Chromosome: 3; Position: 22769918 [Map]; Strand: c
  - AT3G61520.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 11-6032-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TGTGCACATC CCACCAACGA TTGTATTAAC AGTTACCACA TTAGGTTTAA 
TCTCGTCCTC TTTCATCCGA GAAACGACTT CTTTAGCCGT CTCAAGCT
```

AT3G61520.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G28460.1); Has 51879 Blast hits to 14395 proteins in 309 species: Archae - 5; Bacteria - 71; Metazoa - 859; Fungi - 887; Plants - 48189; Viruses - 0; Other Eukaryotes - 1868 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G28370.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G28460.1); Has 52907 Blast hits to 14569 proteins in 306 species: Archae - 7; Bacteria - 68; Metazoa - 890; Fungi - 845; Plants - 49290; Viruses - 0; Other Eukaryotes - 1807 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G28460.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G61520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR