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11-6066-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2395169 [Map]; Strand: w
      • AT1G07725.1 - [+] show detail - exocyst subunit exo70 family protein H6
        Distance: 0; Region: exon1 (3UTR)
      • AT1G07728.2 - [+] show detail - other RNA
        Distance: -282; Region: promoter
      • AT1G07728.1 - [+] show detail - other RNA
        Distance: -292; Region: promoter
    Flanking Genome Sequence: 11-6066-1 - 5-prime edge 
    NTTCTGAATN TGGCAAGNGA AATGTGGACA TATNATATCT ATGGTCTATA 
    ATANCGAANC CCAAAATATG ATATATGGGC TTTTAGCCTA GGACCGGCCT 
    ATGATTCGTT GATTTCACAG AGTTACACNG TATGAGGGCT TTTTTACATG 
    GAGCTATTAC TTCAAATCCG TCGTATGGCT TGGGCTAACC ATATACTTCT 
    TAGTTTTGGA TACGGGCACG GATCTTCCTA AACCAACATA TAGGTCGGTT 
    ATGTAATTAT TTAGATC

AT1G07725.1

Model type
Protein coding
Short Description
exocyst subunit exo70 family protein H6
Curator Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description
exocyst subunit exo70 family protein H6 (EXO70H6); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H5 (TAIR:AT2G28640.1); Has 846 Blast hits to 838 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 47; Plants - 645; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07728.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT1G07725
Link
InterPro Scan - TAIR

AT1G07728.2

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT1G07725
Link
InterPro Scan - TAIR