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11-6069-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1198239 [Map]; Strand: c
      • AT1G04430.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G04430.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -269; Region: promoter
    Flanking Genome Sequence: 11-6069-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATTACAG TATTCTTCTT TTTGGCTTTA AAGTAACGAT TTTTCTTTTT
    GGGCATAAAA GTGAATAAAT AAAAATCGAA ACTTTAGAGA TTCAGATCTC
    CATCTCCACA AGTAAGGAAG GAATGAGACC NTTTNNCNNT GNNCANCNGN
    CCANNCCTAT AANNGGANGA TCCGTACATT GTTTTCGTTG TAAAGGTCTC
    TNTCCATGTC CACACTGTCG ACTTGCTGTT AAATCTTTTT GTTTCCCTTA
    TTTTTATTTG TCTAGTAATT AATATTTGGA GCAAAGATAT ACATATAGAT
    TGTTACAACT TACAAATATT TTATTAGATT TTTCATGATC TTTGTATTTA
    GATTTCCACT TAATGCGTTT TCAATTCC
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1198298 [Map]; Strand: c
      • AT1G04430.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G04430.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -210; Region: promoter
    Flanking Genome Sequence: 11-6069-1 - 3-prime edge
    AATACACAAA CTTCATTCAC TCTCTCCCAT TCTCGGATCA CCATCCCGGC 
    CTAGAGNACT GCGTGNCNTA TACTTTGGTC GGTGAGTTTT CAATCTTTTT
    TCCTTGCTTC TGCGATTTTC ATTCGTTGAG ATTCGTATTT TGCTTCCTTC
    TCATTCTCTG AGATATTCGT TAATCAATGA GCGGTTTTTT TACTTTTCCT
    GGGAAATTGA GTGAGACTTT TCATTAAAAG CTCTCCCGAT AAAATGGAAA
    CTCTACTCTC AGATCTACTA CTACTTTCTA TTTGATTGCA TAAAGATCCA
    ATCTTTGACA AAAAAAATAA AACTTTGTCG GNGGCCATTT TTATAACACT
    TGTGTTACTT ACTTGGTTTA CACTTAACTT GGGTTCTGAA TCAANAGTGA
    GTGGTTTCTG ACCCAATAAA CACGGATCTG ACTCTACCAA GTCTGAATTT
    ATCATGTTCT GTTTATTTTA AGTGCCAGNG GCTTTTTACC AAACTCTATG
    CTTAAAGTCA TATTCTTTAT AAGTGTTCTG TTCTTGATTT CTGCANAAAC
    TCTTTCTTGG AAAGTGCATT TTGTTATCAA GACTCTGAAN AGCTCTTTTG
    GGAGGATAGT AAGGTTGGAT GATGANAGGG AGATCTGATG GAGGCCTAAA
    GAAGCGGCTT ATTGCTTNNG NCTGTGTNGN GGCTCTATNN GNNTGTTTNT
    TGNTNATGNA CNANGGGNC

AT1G04430.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 1231 Blast hits to 1208 proteins in 77 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 0; Plants - 1110; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04430.2

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR