1. Home
  2. Mutant Lines
  3. 11-6091-1

11-6091-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1446396 [Map]; Strand: c
      • AT1G05030.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -4979; Region: intergenic
      • AT1G05040.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Ubiquitin-associated (UBA) protei...
        Distance: 973; Region: intergenic
    Flanking Genome Sequence: 11-6091-1 - 5-prime edge 
    ATGCCTCTTG TGTCAGAGAT TCATTTGGAC CAAAAATCAT CTTAGCTACT 
    CTCTTGAAAC TATGAATTGC TCTTCATCAT CATCTCTGCT TGAACATTCC 
    TTGACTATAT AACCTTTTCA GTGATCGAAT CCTAGAACCT ATGTCAAAAC 
    TATCCAACCT CAAGGATCTC GACCAATCTT TTCAGAAAAA AATTGAACAA 
    CTAAAGTTCC ATTAGTTAAA TCTAGTATAT AAAACAACTA AAATGCTAAA 
    TTTACTTAAT GATTAGAAAA CAGATTGAAC TTGTGAAATC GCTAACGATC 
    AAATGACTAG GTCAAATGAC GGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1446770 [Map]; Strand: c
      • AT1G05030.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -5353; Region: intergenic
      • AT1G05040.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Ubiquitin-associated (UBA) protei...
        Distance: 599; Region: intergenic
    Flanking Genome Sequence: 11-6091-1 - 3-prime edge 
    AGAGGCATGG TGAGTAGAGA ACAAGGAAGG TTTCCAGAAA AGTGATTATT 
    GGTTAGATTG TATAAAGGGG GAAAACTACC GGTCAGTTCG TTTTGTGAAA 
    GGCTCAAGGA AGTAAAGACG GCTTAGGCTA CNTGATTGAG GATGGAATTT 
    CTCCGACTAA GCCCATACCA GTTAGATGCA AGACCTCTCA GTTGGTGAGT 
    CTTCCAAGTT GGGCGAAGAA TGAGGACGAG TCAAAGTGGT TGTAAGCGAG 
    ATCGAGATAC CTGAGGTGAT GAACTCTGAA AAGACTACTA TTAGCATTGA 
    GGGAGCCTCT GAGACATGCA CCATATAGGT CTAGCTTCGT CACTACACCG 
    GTCTCGTTAT CAAATTTGTC GTTGCATTTG AGTAAGTCAA GTTGCATTTG 
    GGGAATGGAA ATTCATTTTT AAAAGCCAAA AAGGATCTCA ATTTGGTCGG 
    GACGAGGAAG TGGCAAAGAA AAAAGACTGA TAACAGAGAN GCTGGATAGA 
    AAGACACANC NCAAGANACA GGAGATGGAG AAACAGGCAA AAGCGGTTTT 
    TACCAATTAA AGACTTCCAA AGAAAAGAAN AAACCGCNNG GAGAAATTTT 
    GGGTACATAT GATTTGGGTT CTGCCACCCA ACCCCCTTTT ACNGATGATA 
    AGACTCATNA NTAAAAACCG NCAAATTGCT TGNCTCTTAA CTTTNTGGNA 
    ATTTAAACTN AAANA

AT1G05030.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: plastidic GLC translocator (TAIR:AT5G16150.3); Has 32095 Blast hits to 31550 proteins in 2260 species: Archae - 588; Bacteria - 15264; Metazoa - 5199; Fungi - 6752; Plants - 2455; Viruses - 0; Other Eukaryotes - 1837 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05040.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Ubiquitin-associated (UBA) protein (TAIR:AT2G33010.1); Has 14 Blast hits to 12 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR