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Mutant Lines
11-6120-1

11-6120-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 17947454 [Map]; Strand: c
  - AT4G38300.1 - [+] show detail - glycosyl hydrolase family 10 protein
    Distance: -1963; Region: intergenic
  - AT4G38310.1 - [+] show detail - Galactosyl transferase GMA12/MNN10 family protein
    Distance: -1028; Region: intergenic
Flanking Genome Sequence: 11-6120-1 - 5-prime edge
```
ATACTGTAAG ATTTGGCTCT CTTATTAATC GCATTGGTTT AGATTATGAT 
CTCTGTGTGG AATCGAATCA AAATTATCAA TCTGGTTCGT TGGAATTGGA 
TAGTGAAAGT GAAACAGCGA TGGGTTTTAT GGGTTTACAT TGGTTTTGAA 
ATTCAAATTG ATCTTGGTTC GGTTTACTTT GGTTTAGAGA AGAAAACAAA 
AAAAAATAAN ACNCNCGACG GGTTTTTGAN AATGAGGNGC GTGGATC
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 17947570 [Map]; Strand: c
- AT4G38310.1 - [+] show detail - Galactosyl transferase GMA12/MNN10 family protein
  Distance: -912; Region: promoter

TACAGTATAG CTTAAAATCT TAGCTAAATC CCAAAAACAC GAGATTCTAG 
GCGAAAAGAG AAGAAAGAAA AATTGCCAGA ATGCATAAAC AGCAGAGGCC 
AGAGGCCTCC ATTTTCACCG GAGTGACAAA TTCCGGGATT ACNTTCCTGG 
TCGGAGGTGA AGAGTCGGAG TGAAACGGCG ACGTTTATAC GTGGGCCATA 
AATGGGCTTT GACGGAACTC AAATTATATT AAAAGTATAT TTAGCATTCA 
AGTAATTAAT TTAGAAATTC ATTTGTTTCT GTAAAATATA TATATTTGCT 
GTAAACAACG ATTGTGATTC TGGTTTCTGG ATACTTATAA AGCT

AT4G38300.1

Model type: Protein coding
Short Description: glycosyl hydrolase family 10 protein
Computational Description: glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G38650.1); Has 1908 Blast hits to 1902 proteins in 430 species: Archae - 10; Bacteria - 1128; Metazoa - 20; Fungi - 351; Plants - 265; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38310.1

Model type: Protein coding
Short Description: Galactosyl transferase GMA12/MNN10 family protein
Computational Description: Galactosyl transferase GMA12/MNN10 family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: Galactosyl transferase GMA12/MNN10 family protein (TAIR:AT4G37690.1); Has 254 Blast hits to 254 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR