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11-6136-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 87895 [Map]; Strand: c
      • AT4G00210.1 - [+] show detail - LOB domain-containing protein 31
        Distance: -1000; Region: promoter
    Flanking Genome Sequence: 11-6136-1 - 5-prime edge 
    CTTGCGGGGG AAGCAAACAG TGATCAGTGT CATGTCTGTT TCTGACTATA 
    CGATTTGTAG AAACAAGAAG CAACATACAT CTCGATTTTC TCTCTATAAT 
    TCTATCACNG AAAGCTTGTC CATAGAGAAC TAGTTTGACA AAAAATTATA 
    TACAGTATAT AACATATATA AAAGAATTAC ACACNGTGTG GTGAGGGATC 
    GCACGTGTGT GTGACAGGGA AACCTGCGGC TGAGTGGTGA GAGAGAAATA 
    CGTCAGCAAG CAGCTAATTG TGTTTTGCTT CACGCAAAGC ATTTGTGTTT 
    GTTTGTCCTT TGTATATATC ACAAATCTGC TCTGCCGTTG CTTCCAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 88011 [Map]; Strand: c
      • AT4G00210.1 - [+] show detail - LOB domain-containing protein 31
        Distance: -1116; Region: intergenic
      • AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
        Distance: -2025; Region: intergenic
    Flanking Genome Sequence: 11-6136-1 - 3-prime edge 
    CCCGCAAGTA CAACCTCAGT CAGTCAGTTA CTGTCATGTC TCTCTTTCTC 
    TCTGTTTGAC AAGATCCCTG ACCCTTGTTC ACTTCCCTAA TTTAAAGCCT 
    TCTCCTTAAT GGGCCGGGCC TTGTATCTGT TTCGGATC

AT4G00210.1

Model type
Protein coding
Short Description
LOB domain-containing protein 31
Computational Description
LOB domain-containing protein 31 (LBD31); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 19 (TAIR:AT2G45410.1); Has 416 Blast hits to 414 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00220.1

Model type
Protein coding
Short Description
Lateral organ boundaries (LOB) domain family protein
Curator Summary
Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.
Computational Description
JAGGED LATERAL ORGANS (JLO); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 18 (TAIR:AT2G45420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR