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11-6146-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19554554 [Map]; Strand: c
      • AT2G47700.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-6146-1 - 5-prime edge 
    AGAAAAGGGA GAGTCCAATG TCATTGTCCG GTTTTGAACC ACGTCATCTC 
    TAACAGGTCG GACGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG 
    NNNNNGNNGA GANATATATN TNTGTGANAN NTTCNCCCCG NGTGCGCNCC 
    NNANNGCGCA CANNATCNGA GAGACACANA NNGNGAGNGA GACACGNGNT 
    CTCNTNTTTT TTTGTGNNAC ACCCCTCTNT TTTTTTTTTT TTTNTNCTCN 
    NAAAAAAAAA AAATTTTTTT NTTCCCCCCC CCCTNTNNCN CNNGGGGGAN 
    NATATNNNNC CNANTNTANA NNNGGGGGGC GANAAAANTN TCTTNATNNG 
    GGGGGGGNGT GCCCCCCGNN NACGCGCGCN CCCNNGGGGN NTCNCNCNNC 
    CTNTNAAAAN CTCNCGCGCT NTNTCNCCCT ANNGNGNGCG CTNNGNGNGN 
    GCCCCANANC GGGGGNTNCT CNCGNGNGGG NCCCCCTNCC CNGNGGGGGA 
    NANNCCCCCC CNCCCNCTCT NTNTCNNNNG NGNGNNNCCC CCCNCNCNNN 
    NNNNGNNNNC NNNNGGGNTT TTTTNTGNNN ANNA

AT2G47700.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RED AND FAR-RED INSENSITIVE 2 (RFI2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G05545.1); Has 457 Blast hits to 456 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 17; Plants - 198; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).
Link
InterPro Scan - TAIR