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Mutant Lines
11-6154-1

11-6154-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 4; Position: 426872 [Map]; Strand: w
- AT4G00990.1 - [+] show detail - Transcription factor jumonji (jmjC) domain-containing protein
  Distance: -72; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCC CTCTGGACTG TTGCCACGTC ACTCTCCTTT 
AACTATTTTG ATAGTCCCAA AGCTCCGACG GCATATAAAT CGATGAAATA 
ACGACGTTCG AAGAAACTCC AGTGGTCTCT TCATTTTCTT TTTGTATACT 
GGTAAAAATT GGTGGTCTCT TCTTTGTCTC CGAGTATGGA GAAAATGAGA 
GGGAAGCGAA TCAGACCAAG AGATTCCGGC GAGTTAGTCG AAGATGGGAG 
ATCTGAAAAC GAGCGTAAGA CGAGGAAGAA AGAGAATGAT GTTGTGAGCA 
AAAGAAGAAT CGGAAGAGGA AGAGGAGAGG TTTCGAAGCG ATCTATTGAA 
ATAGACATTT CTGATGCCGA GAAGGTTAAT TCCTTTCTAT AATTGCTTCA 
TTCAAATTGA TAGATGAATC TCTTGTTACC TGAATT

3 prime edge [+] show sequence

Chromosome: 4; Position: 1270370 [Map]; Strand: c
- AT4G02860.1 - [+] show detail - Phenazine biosynthesis PhzC/PhzF protein
  Distance: 0; Region: intron1 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAATAT 
GGGCTTTAAA GTCTACTTCG TGAACGGTAC GTAGTAATTA ATTAGGGAAA 
AAGACGTTTC ATTACTTTTT ACTATTCTAT CGTTTCAACT TCTGTTTTCT 
TTCCAAATTT AACCAATTTT TTAAATCACC AAGTGGTTCG ATGGTTGTAC 
ATAATTTTTA ATGGGTTTTG GTCTTGGGTT AGAGATTTCA AATTCATGGC 
CAACCCAATT TTCATTTTAA GTGCTTCTTC TATGATGATA TTTTACGAAA 
ATAATACAAC GGATTTTTTA TTTTATTTTT GTATCAATGT TAAGTATTTA 
TACCATTTTC GAAATTGTGA CAGAAGTTAC ACGGAATACA TGTAGCGGAA 
AAATAAATTT AAAGAAGGCA CAAACAAAAA CAAACAGTAA TAGTGGTTAA 
CGTTAATCAA AAGCGGAAAC AAGAGAAGAA ACAAACAGTA ATACAACGGA 
TTTGACCAGT CTCATGTGGC AATTGTCGAG GAAAGAAGTG ATGTTTTCTG 
GAAATTGTTA GGCATTANTT ATCGGAGAAG GGAAATGTGA AATGCACATT 
GNTGTTGGCT ATTAACTTGC TTTTAAAGGN GACTTGAACA TACTTGGNGT 
CTTATGTTGA TTCCNAANCN ATNANNACTT TNGATTAATC TANTTTACNA 
AGNTCTTTTA NCNTCNCCTT NTCNATTTTN TNNTNCCNTC NNNAN

AT4G00990.1

Model type: Protein coding
Short Description: Transcription factor jumonji (jmjC) domain-containing protein
Computational Description: Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G02860.1

Model type: Protein coding
Short Description: Phenazine biosynthesis PhzC/PhzF protein
Computational Description: Phenazine biosynthesis PhzC/PhzF protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenazine biosynthesis PhzC/PhzF protein (InterPro:IPR003719); BEST Arabidopsis thaliana protein match is: Phenazine biosynthesis PhzC/PhzF protein (TAIR:AT1G03210.1); Has 4066 Blast hits to 4061 proteins in 1265 species: Archae - 50; Bacteria - 3051; Metazoa - 120; Fungi - 130; Plants - 90; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink).
Link: InterPro Scan - TAIR