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11-6173-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7773442 [Map]; Strand: w
      • AT3G22060.1 - [+] show detail - Receptor-like protein kinase-related family protein
        Distance: 1102; Region: intergenic
      • AT3G22070.1 - [+] show detail - proline-rich family protein
        Distance: 1887; Region: intergenic
    Flanking Genome Sequence: 11-6173-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT ACTTACGCAC TTCCGTATAC TTAAAGTTTG 
    ACTTGATAAC TATACAAATC ATGTTCAAAT GGTAAGGTTG CTGTCACCTC 
    CTTGAGTCCG AAACTTAGGG ATCGGTCAAC AGAGCTAGTG TTAATCAGAT 
    GTGAATCTCT TATAATAAGC ATAAAATCAA ACTATTAGTA TTTATTGAAT 
    TAAAAACTCA ATGATTTGTT CTCCAGAGCT AGATATTTTA ATGGTACAGA 
    GAGGCAGACG TTTTTCTTTT GGTAATCAAG GTCTGACCCA TGTAATCTAG 
    AGATCAGAGC AAGTTATATA AGTCTTGTCT TCCTTGTAGA TATCGGCACT 
    CATAACCTTA AAAGTTCTTT TTTTAGGTGG CCACTGGCCA GCTTGCCATA 
    GTCAGTCTCA GTCCAATTGG TCTACAGGTT TAAAGCAAAT TTATCAAAAT 
    TAGACCAATA AATCAAAATA TTTTAATGTA CTTTTTCTAT CATATCTTCA 
    ACCATTCTAG AAATATTTTA AAATATATAA ATTATTCGTT CGAAGTTTTA 
    AACTTTAAAC TAGTAACCTA TTTTATCTTA AAAATTTTAA GTGTAGTTTG 
    AAATAATGAT TAGCAAATTT ATTAGATTAA CATACATAAG AGGGAACAGG 
    TTTATNTAAT GTTGGAACTA AAAGGAAAAT NTTNAAAAAT GAAAAAAAAA 
    ANNNTNGGGG CNAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7773447 [Map]; Strand: w
      • AT3G22060.1 - [+] show detail - Receptor-like protein kinase-related family protein
        Distance: 1107; Region: intergenic
      • AT3G22070.1 - [+] show detail - proline-rich family protein
        Distance: 1882; Region: intergenic
    Flanking Genome Sequence: 11-6173-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAT 
    CACGTATAGG CTTATCTTTG ATTTGACCAA TGATGGGGGA CAAACAATTT 
    TATTGTTTCG TAATTCTTAA TGAGCAGTCC TTTAAACTTT GAAAATATAG 
    GTCCTTAATA TCAATAGAAT TAGAATTTAG TTTAATGTTG TCCTTTTCAT 
    ATAGGGTTTC TATATTTGTA TCTTGCATTC TTATTTTTGT CCTGAGTGTA 
    CGATTTTATC CGAAAACTGT GAGAATTTTT TCAGAATATT ATGCGGGATT 
    TTCGTGGTAG TGGTCGCCGC TTACGCACAA AGAAAGGATT GGGAAAAAGC 
    GAAGGAGCAA CGTGGTTCTC CTCCTTCGTT GACCTGTCTT CATCGCAATG 
    ACTCAGCATA GCACATGTGA CCAATATCTT CTCCTAGTTA TCCGTTGACG 
    TTTAAAATCT TTTAGTCAAC AAACCAATCA GCACCTCATA ATGTAAAACA 
    TTTTCTGAGT CTCTCATATA TACTTTGATG AAATTTACAT TTTCTATCCA 
    AAAGCATTTT TTTTTTTTTA AAANNNANNN GGTTTGGGGN NNAANCCCNN 
    ATNCCCAACC CCAAACCCNC TTTTNGNAAN ATNNNTTTNG NTNNAAAGGN 
    NTTNNAANCC GGGAACNTTT AANTTNNNNN CCGGGGNNGN NAACCNCCGG

AT3G22060.1

Model type
Protein coding
Short Description
Receptor-like protein kinase-related family protein
Curator Summary
contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain
Computational Description
Receptor-like protein kinase-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: cell wall, vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF26) (TAIR:AT3G58310.1); Has 1682 Blast hits to 1490 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G22070.1

Model type
Protein coding
Short Description
proline-rich family protein
Computational Description
proline-rich family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, inflorescence meristem, root, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; Has 95281 Blast hits to 41469 proteins in 1893 species: Archae - 292; Bacteria - 17580; Metazoa - 30806; Fungi - 11508; Plants - 12978; Viruses - 3158; Other Eukaryotes - 18959 (source: NCBI BLink).
Link
InterPro Scan - TAIR