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11-6178-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1247785 [Map]; Strand: c
      • AT1G04570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-6178-1 - 5-prime edge 
    GTCTGAGATA CCGAATAAAC GGTCTCCAGT CTTATGCGCT CATGGCTTCA 
    GCAGCTGGTG GAGTCCTTGG AAACTTACTT GGAGGATATC TCTTACTCAC 
    AACACCTCCT AAGATCTCCT TTCTTGTATT CTCTGCTTTG TTGTCTCTGC 
    AGCTCGTTGT TTCTTTATCT TCCAAAGAAG AATCTTTCGG CTTACCACGG 
    ATAGCAGAGA CAAGCTCGGT TTTGGAGAGC GTCAAGAAAC AGATATCGAA 
    TCTTAAGGAA GCAATTCNGG CAGATGAAAT C

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1247901 [Map]; Strand: c
      • AT1G04570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-6178-1 - 3-prime edge 
    TCTCAGACCG TATTCCGCAA CAAGAGCGTC TTTTGCAACT TCAGTGATGG 
    ATGCTCCAAG GTTACTCAGC AGGACACATG CCACAAGAGA AGGAAGAACT 
    TCTCTAGCTC CTTGAAATAT CCCCATTGAA CCCCATGCTA AAACCTGCAG 
    ACACACTGAC ACAGAATCGC CACAATCAGC AAGTTTCTTC ATTTCCTATA 
    TTTGGTTCTA AAATCTCTTA AGGAATTGGA GCAGACAGAG AGAGAGAGAC 
    TTTGGAAAAA CTAACCTCCA ATGGCGATGT AAGGAACTCT ACGACCACTT 
    CCAATGTAAA GAACATCTGA GAGAACACCG TAGAGAGGTT TAGCCACCAT 
    GGGAAGACTG CAAGAGTATT GCACAAGCTG AAGCGTCGAT GGTTGGAGGG 
    CGAGGCTATG AACCATATGG AAGTTAAGTG CAAGCCATGG GAAACATCTT 
    GATCCTTGTA CCCAATAACC TAACCCGCAC AAAACCGAGA TTCCTTTACC 
    ACCCACTTGT TCAAACCTCG CCGTTTCTTC AAATTCAGAC ACACCATTGT 
    TGTTTCTTCT TCTCCTTATC GAGAGACATG CGAGTGTGGT CGCTCTTCTT 
    GGTCTGGCTT CCCCCATGAA AAGGGTNTTG NTATTGCTCT GCCTCTNTTG 
    NNGNNGNNGN NGCCTGNGAA TGGACNAAAG NGGNGGNTNN AANAACTTGG 
    NTGGGGAGTT TN

AT1G04570.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G33280.1); Has 816 Blast hits to 814 proteins in 271 species: Archae - 6; Bacteria - 387; Metazoa - 0; Fungi - 18; Plants - 232; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link
InterPro Scan - TAIR