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Mutant Lines
11-6218-1

11-6218-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 20477045 [Map]; Strand: w
- AT3G55240.1 - [+] show detail - Plant protein 1589 of unknown function
  Distance: -2282; Region: intergenic
- AT3G55250.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: -2244; Region: intergenic

CATGCTATCA AAGTTCATTC GAATCCGTAT GAGTGATTAT GTAGTTATAA 
TGAGCGTATA TTTCATTTAT AAGGAATTTG AAAACGGTTT ATGTGTTACA 
AGAAAATAGT GTATGTATTG TAACGACTAA CGTATATATT ACATAAAAAT 
TACTACGGAG TTTACTCTAT TTTCTTCTGT GTGTTCATTG TTCTATTTTC 
TCTGTGTTCA TACTTATATT CTTTTGGCTT AGAGATAATC ATATACGTAT 
AGTATACCGG ATTTTACTTC TAAAGCGCAT TCAGTTAAAT ATGAACTTTC 
AGTTTTTAAC TTTTCTACCA AATATATTAA GGCACATCAT AACTACTTTC 
CATGGTTATT ATGCTTGGTA TCTTGTGGTC GTGGAAGCTG AGTCTTACAT 
GACTTCATAT AGTTATTTTC TTTCTTTCTT TCTAAATCAG CTATTAGATA 
CTGGTGTAAT TTATGGTTAT TCTCTTGCAA CTATATTCAT AATTTAGCAA 
AGAGACTATA TATTATTCAT GGATCACATT TTGTCCAAAT TGACAAAGCC 
ATCAAGAATT ATTGATTACC CTACCCATAT TGAATGTCTA TCGTTCGATT 
TTTCTCAAGA ATGAAACTTT GGTGGGGTTT CTGATTAATA CTAGTAAGTC 
ATTAAGAGGT ACGAAATAAT ATCNCAGAAG ACGAGACAGC A

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 20476921 [Map]; Strand: w
  - AT3G55240.1 - [+] show detail - Plant protein 1589 of unknown function
    Distance: -2158; Region: intergenic
  - AT3G55250.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: -2368; Region: intergenic
Flanking Genome Sequence: 11-6218-1 - 3-prime edge
```
ATCTTAAGAG CTGGATAAGG AAGTATCTTA GGTAAAAGAA ATAAGTGGAT 
GAGAGAGAAT AGGCGTCTTG GTTTGTAATC TTGTTGACGA GGAGAGGGAA 
TGAGAGAGAA AGTGATCATG AATAGGGTTT GAATTTGATT CGAGGGAATA 
GTTGCCTGTT TCAGGACTCA AATTGAGAGG TCCACATGAT GAGGAATATG 
TGTAGTTTTA TTTAATGTCT GAATTTGATG GATC
```

AT3G55240.1

Model type: Protein coding
Short Description: Plant protein 1589 of unknown function
Curator Summary: Overexpression leads to PEL (Pseudo-Etiolation in Light) phenotype.
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: developmental process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT3G28990.1); Has 220 Blast hits to 220 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G55250.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR