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Mutant Lines
11-6223-1

11-6223-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 2; Position: 16187839 [Map]; Strand: c
- AT2G38710.1 - [+] show detail - AMMECR1 family
  Distance: -666; Region: promoter
- AT2G38710.2 - [+] show detail - AMMECR1 family
  Distance: -704; Region: promoter
- AT2G38720.1 - [+] show detail - microtubule-associated protein 65-5
  Distance: -208; Region: promoter

TTTTTGGCGG TAAACTATAA AAAAAATTAG TATCCCTCTC GAATTTCGTG 
CCCGGGGAAG TCCGAATGTT TTTTTTTTTG NCCNTTTTTT TNGNGNAANT 
TNTAAANGGG NTCCAAAAAN CCCANTTTTN TAAAAAANAN NNAACNTNGN 
TTNANNACCC AAAAAAAAAN GGTTTTTTTT TTNNNNAAAA AAAAAAAANT 
TTTTTTTAAA AATTTCCNTT NGTTTGNNTT TGNNCTTTTN NAAAAANGGG 
GNNTNNNNNT TTNNNTTGGG GGGGNNNNNG NAANNAANTT TTTTNNGAAA 
GGAAACCCGN TNAANNAAAT TTNNCNAANC CCNNCCCTNT TTTTNNGNAA 
AAAAAANTTT TTTTTTAANA AAAACCNNAA NCNANNTNNG NNGGNAAAAA 
ANGGNNAANN TTNGGGTTTT TTTTTGGGGA AAAANNAAAN TTTTNNNTTT 
NAAAAAAANG TTTNTTCNAA AANTTTNNTT TTTTTTTTTN GGNNNANNNA 
NNAAAAANNG GNAAAAAAAT TNNTTTTGGA NNNNNNNCCT TTAANTTTTT 
TTTTTTTNGN AAAAAAAAAA TTTTTTTGGG ANTNNNNGGG GGGNNNANNT 
NTTTTTGGGG NAAAAAAAAA AACNNNNNGG GGGGGGGAAA AAAAAAAANT 
TTTTTTTTNN CCCCNNNTTT NNNAAAAAAA NNCCCCCCCC NNAAANTTT

3 prime edge [+] show sequence

Chromosome: 1; Position: 148292 [Map]; Strand: w
- AT1G01390.1 - [+] show detail - UDP-Glycosyltransferase superfamily protein
  Distance: 0; Region: exon1 (3UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATNCC 
TNGCGCNNGA TAANACATGN TTNCCNANNA NGNCANNGTG CTCTANGGNN 
TCACNACCAT ATCNNTNGGN ANCTANACTN CNGCNTCCAT NANAANCCNT 
CTGACGGTTT NTNAGCAANA GTNATNTANC ACGGCATCNC CNGCTGGCAN 
NGAGACATAC ATAGTATTGT GNGTATCANC CANNNNNTGC ANTTTAACNA 
TTNATTAGAN AGAGTGTGCA NNGATGCACA TTANTNCTCA GCTGTATACT 
ATATTTTTGG ATTTTGTCGN GTATGTNAAA CGGTTTTATN ANATGCCTAA 
NNTATGCCCA GNNGNNNNTT TCTTATGCCT CAAGCTCNTT GCNNCAAGCC 
AATNCAGTAT CCACAAATTA TTTTGGGNGA TCGATTAAAA CTTTACCTTC 
AATGTATTAA AGGNNCCATT CGNGATGTCA TAAGNNCCCG AACACACAAC 
TACTGNCAAA NNTNAGGAAC GNACCGTGCN NAATNACCAN CGAATATATA 
TANGGATATN CGGCANANAC NNTCTCTCTC ATTATTATAA NNNNGANGTN 
TAAGTTGGCC ATNAACGTAA TNGAGATCTT GGATGATNCT NCATTACCNA 
AAACCTCTCA GTCTCTTNGG GGNGNNACTT CCTGGAANNN NGCNAGCTAT 
NANGGGCCCC CTNCNNGANC GAACAAANNG NCNNNAATGN CCTTANGAAN 
GNGNCATGAT GGGATNGTCT TACCNAACTA ATGGGTNGNG ANNTNGA

AT1G01390.1

Model type: Protein coding
Short Description: UDP-Glycosyltransferase superfamily protein
Computational Description: UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7970 Blast hits to 7908 proteins in 429 species: Archae - 0; Bacteria - 359; Metazoa - 2438; Fungi - 37; Plants - 5024; Viruses - 48; Other Eukaryotes - 64 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G38710.1

Model type: Protein coding
Short Description: AMMECR1 family
Computational Description: AMMECR1 family; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMMECR1 (InterPro:IPR002733); Has 1012 Blast hits to 1010 proteins in 455 species: Archae - 211; Bacteria - 342; Metazoa - 168; Fungi - 130; Plants - 53; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G38710.2

Model type: Protein coding
Short Description: AMMECR1 family
Computational Description: AMMECR1 family; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMMECR1 (InterPro:IPR002733); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G38720.1

Model type: Protein coding
Short Description: microtubule-associated protein 65-5
Computational Description: microtubule-associated protein 65-5 (MAP65-5); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1); Has 9645 Blast hits to 7381 proteins in 767 species: Archae - 226; Bacteria - 1139; Metazoa - 4615; Fungi - 969; Plants - 706; Viruses - 30; Other Eukaryotes - 1960 (source: NCBI BLink).
Link: InterPro Scan - TAIR