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Mutant Lines
11-6235-1

11-6235-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 21581950 [Map]; Strand: w
  - AT3G58290.1 - [+] show detail - TRAF-like superfamily protein
    Distance: -89; Region: promoter
  - AT3G58290.2 - [+] show detail - TRAF-like superfamily protein
    Distance: -89; Region: promoter
  - AT3G58290.3 - [+] show detail - TRAF-like superfamily protein
    Distance: -89; Region: promoter
Flanking Genome Sequence: 11-6235-1 - 5-prime edge
```
CGGGATAAAC TAACAAAATC GGTACTCAAA TTTTGTAAAC CAAACCCTAA 
TCACGTTCGA GGTATAAAAT AGAAGAAAAA GTTATAAACT AACATTCGAC 
TCCAAGAAAT TTTGATAATC GAGCAGAATT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 1183911 [Map]; Strand: c
- AT1G04390.1 - [+] show detail - BTB/POZ domain-containing protein
  Distance: -207; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
TAATAATCAG TAAAAGAAAT TTAGAGTTAA AAGACACACA TTCACATATC 
TATGTTTGAA CATTATTTAG CTCGTTGACT AGCTTGAAGA AAAAGAGACA 
ACGACCCACG TTTATGTCTT TAATCTTTAT AACAGGAGAT ACATCAAACC 
GGAGGGAGAA GAAGTTGTTT GAGTCTTAAC AAGAATGTGT AACATAAATA 
CAAGGAGATC GAGTAATTAG TGTGAGAATC ATCTTAAGAG ATTATTAGTG 
TTGTAAAGTG TTCAGAGTTA AGTTTACTAA TGAATGAATG ATACTTGAGG 
AGCAAGGATT GCTGAAATCG TCGGAGAAGA TGAACAGACG GGAGAAACGA 
TGAAGAGATC GCGAGCAGAA TTAGGGTTTT AGAAGTCGTC GCTCTAGAAG 
ATGAACAAAT AGAGACAAGG GTCCCAGAAG GACATAAGCG GCTAGACAGT 
GCAGCGACGG AGGCGACAAC TGCGCANCTA GGGTTGGTTT TGAAATCNNN 
NGGATTNATA TNGGGNNNNT NNTNNNNNNT NNNNNCNNTN NNNNTNNNCT 
NNTNNNGNNN NNNNCNG

AT1G04390.1

Model type: Protein coding
Short Description: BTB/POZ domain-containing protein
Computational Description: BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); Has 143 Blast hits to 130 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G58290.1

Model type: Protein coding
Short Description: TRAF-like superfamily protein
Computational Description: TRAF-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) with TRAF-like domain (TAIR:AT3G58280.1); Has 764 Blast hits to 652 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 9; Plants - 724; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G58290.2

Model type: Protein coding
Short Description: TRAF-like superfamily protein
Computational Description: TRAF-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) with TRAF-like domain (TAIR:AT3G58280.1).
Link: InterPro Scan - TAIR

AT3G58290.3

Model type: Protein coding
Short Description: TRAF-like superfamily protein
Computational Description: TRAF-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT3G58250.1).
Link: InterPro Scan - TAIR