Home
Mutant Lines
11-6245-1

11-6245-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1230102 [Map]; Strand: w
- AT1G04510.1 - [+] show detail - MOS4-associated complex 3A
  Distance: 0; Region: exon16 (CDS)
- AT1G04510.2 - [+] show detail - MOS4-associated complex 3A
  Distance: 0; Region: exon16 (CDS)

GAAAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
CATCCTACTT TCATCCTCAG CTGCTTCAGA TATAAGGTGA GGTCTACTTT 
GATACACAAT GTTGGGAATT AATTGATATA GGAGCTCACT TTGATAACGA 
GATATTGAAA GATAGTTGTG CAAACTCAAT TAACCTGCTA TCACCAGAAA 
TGCAGTTTGG GTATATGTAT ACGTTTCTTC TGCAAATCAT ACTAATCGAA 
AACTTGTGCT TCAATGTTGT AGAGTATTCC AAACAGCTAG TGTAAAAGCA 
GAATGGAACC CAATCAAGAC TCTTCCCGAT CTGTCCGGTA CAGGTAAATG 
CTACATGTTA AGCT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 1230095 [Map]; Strand: w
  - AT1G04510.1 - [+] show detail - MOS4-associated complex 3A
    Distance: 0; Region: exon16 (CDS)
  - AT1G04510.2 - [+] show detail - MOS4-associated complex 3A
    Distance: 0; Region: exon16 (CDS)
Flanking Genome Sequence: 11-6245-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
AGCCAAGATA AGATCCGCTA TGGTCAAACT CCACTGCACA AAAAAAGCTC 
ATTCAGGCCT TAAGAAATGA AAACTCACTC AACAAAATAG ACTAGTAAGA 
GTGCTCAGGT AGTTGAATAC CCGAGTTTGC ATCTGGAAAG TCAAAGGTTC 
GGAAGTTCTT TAACTTGCGC AAGTCCCACA ACCTAAC
```

AT1G04510.1

Model type: Protein coding
Short Description: MOS4-associated complex 3A
Curator Summary: Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.
Computational Description: MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 53700 Blast hits to 26315 proteins in 787 species: Archae - 70; Bacteria - 7824; Metazoa - 20612; Fungi - 11571; Plants - 6404; Viruses - 0; Other Eukaryotes - 7219 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04510.2

Model type: Protein coding
Short Description: MOS4-associated complex 3A
Curator Summary: Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.
Computational Description: MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR