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11-6278-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7387280 [Map]; Strand: w
      • AT1G21100.1 - [+] show detail - O-methyltransferase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-6278-1 - 5-prime edge 
    CTTTACCGTT TTCAGGTAGT GATTTCCAAC AATTCTTAAG AATCTTGACA 
    CAATCTTCGT CGGTCCAATC ATGAAGTATA CGCTGTAAAA ACATATTTAA 
    AATTAGTATA AAATTCTAAT AGCATGTAGA CACCTTCCAA AACATATAAG 
    TAATAAGTTA CTTCCAAAAC ATGTAAGTAA TAAGTTGTTA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7387209 [Map]; Strand: w
      • AT1G21100.1 - [+] show detail - O-methyltransferase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-6278-1 - 3-prime edge 
    ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTTA 
    CCGTGGTTGT TATAGAATTA GTCACTCCTG ATGAGGCAGA GAATGGTGAC 
    ATCAATGCGA ACATTGCCTT TGACATGGAC ATGTTAATGT TCACCCAATG 
    TTCTGGTGGA AAAGAGCGAT CAAGAGCTGA GTTTGAAGCT

AT1G21100.1

Model type
Protein coding
Short Description
O-methyltransferase family protein
Computational Description
O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; EXPRESSED IN: stem, cotyledon, hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G21130.1); Has 3375 Blast hits to 3370 proteins in 588 species: Archae - 3; Bacteria - 947; Metazoa - 107; Fungi - 659; Plants - 1542; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).
Link
InterPro Scan - TAIR