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11-6297-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16760129 [Map]; Strand: c
      • AT4G35230.1 - [+] show detail - BR-signaling kinase 1
        Distance: -2038; Region: intergenic
      • AT4G35240.1 - [+] show detail - Protein of unknown function (DUF630 and DUF632)
        Distance: 820; Region: intergenic
    Flanking Genome Sequence: 11-6297-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATGTGC GCCAATAGTT CTCGGTTCTT GAAGCTGCCG 
    TGCCTAACAT GATTAGCGAA CTATTTCCAA TCATTAGCCT GGCCTCTGGC 
    CAGCTTCAAA CATCAATGAT TCGTGTGAAA CTATAATAAT ATTTAAACCC 
    AGTGGTCTCA AGAGTAATCT CGACTAGTCC ATGCGCCAAT AGTTCTCGTC 
    TTGAAGCTGC CGTGCCTAAC ATGAATAGCG TGAACTTGAC GTCTCATGTG 
    TCAATCTTTT TTTTTNGTTN CTCTTTATTA GTAATAATAA AANGAAATAA 
    AGTTAATANC ATGCAAAAAA TAAGNGCCAA AAGTTNTTNT NGCNATCCAN 
    CCAANGGTTA AATAATCAGT NCTTATTTAG TNTTAAAATN TAAGTANANA 
    TAGGGCTNGA NCNTNTAATC NTNTAAAAAA AGCCANTTAC TNNGGAAAAT 
    NATNGGATNA CTTNACTNTT NGCCTTTTTT ACNNAAAAAA ACAGCTNTNG 
    GGTTNTTGAA AGNTACN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16760124 [Map]; Strand: c
      • AT4G35230.1 - [+] show detail - BR-signaling kinase 1
        Distance: -2033; Region: intergenic
      • AT4G35240.1 - [+] show detail - Protein of unknown function (DUF630 and DUF632)
        Distance: 825; Region: intergenic
    Flanking Genome Sequence: 11-6297-1 - 3-prime edge 
    CTTTACACAN NGTNGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC 
    CCTNTTTAGN NNGAGANTCA CCGACGCACC ATTGNGTGGA AACATTATAN 
    ATAGTTTCAC CNAGACTNAT TNATGACNCG ANGNGGTCNG GNAGGCCNCG 
    CTAATGATAG GAAATAGGAC TTCTCGTATT ANTATCGTAC TATAGNAAAT 
    CNANCCTAGC CNTNACATCT TGNTGGCCAT GCATAATTCG GATATCATGA 
    NTCACTNGCT NTNAACNAAT ATCTCTNTCA CGTANATCGT TCACTACTTT 
    TATCTGCGAT CTNCATAACA TGGTNACNNN AAGAGCCAAC ACGATAACGA 
    TGAGGCTAAA CNTANAACTN NGGCNTGTTA AANANNANNA TTNATATNAT 
    AACTAATTNA ATTAGTNTAT AATGCNGCGN ACGTTNTATA NNTACNGCAA 
    ATAGNNTGGT ANNAAGNAAG NACAGAANGC GACCAGTTTG ATTTAGAANA 
    NCATGNATGT GATTNATAAN ACTTTGCAAT GGGACAAGAN ANANCGNGNN 
    NCAAAANANT TNAAAANAAN CGGNGTGNTG TGATCACTNG GAGANNNNGA 
    AAGAACNANA AGTTNCGNNA GGTCCNANTT NTNNGCAAGT NGCNCANNGA 
    ANNNGANAAA CNCNNATGTT NNNATTTNAG GTGCGGGNAT GNGNNNGTTN 
    GTNTTGNAAA NNACNNNGCN ANGGTGNNGG NAAANAANAG GAANNTCGTT 
    NGNGGATTGA NTANCGANCN CNAGNCGCNG CAANATTCNT TANAGATNGA 
    NNCCTNNNT

AT4G35230.1

Model type
Protein coding
Short Description
BR-signaling kinase 1
Curator Summary
Encodes BR-signaling kinase 1 (BSK1), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.
Computational Description
BR-signaling kinase 1 (BSK1); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G59010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35240.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF630 and DUF632)
Computational Description
Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G17110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR