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Mutant Lines
11-6303-1

11-6303-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 26950977 [Map]; Strand: w
- AT5G67560.1 - [+] show detail - ADP-ribosylation factor-like A1D
  Distance: 0; Region: intron1 (CDS)

GCCAGGACAA NCGTGANANN NNATGNNNGN TNTAGANGGG NTAANCATGN 
ACGANGAAGA NNGGNAGAGC ACGGAACTCA NTNTNCCAAN AAAAATGNNG 
ATNGCNGNCC ATTTGCCCAN ATATGCATAG TCTGACAATG CCCTTATNGC 
AGCCTCTTCT TCAAGCAAGA AATGGAGCTT TCATTGATAG GACTTCAAAA 
TGCAGGAAAG ACATCACTTG TTAACGTTGT TGCAGTAAGT AGTATGCTTC 
CCCAAAAATC GTTCCCTCTT TTTTTCTCTA AATGACTCGN TGATGGCTTC 
CTTTTGCATT TCCTTGTCCA GACTGGTGGA TACAGNGAAG ACATGATCCC 
TACGGNGTGT TATACTACTT TTAGGNGGCN AAGTATTTGC TTGCTCTTGG 
ACTAATCGTA AAAAGGATGT TTACTCTTTC TTAGGTNGGT TTCAACATGA 
GGAAAGTGAC AAAAGGAAGT GTCACGATCA AGCT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26939545 [Map]; Strand: w
  - AT5G67520.1 - [+] show detail - adenosine-5'-phosphosulfate (APS) kinase 4
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 11-6303-1 - 3-prime edge
```
ACCAGAACGG AATTACGTGA TTATTACCGG ACCGCGATGA AATGGATTCA 
TCTTTTGCCA TGATCGGACG GAAGTAGCTC ATTCTCCGAT GAATTTTCCC 
AGCGAAGCCT
```

AT5G67520.1

Model type: Protein coding
Short Description: adenosine-5'-phosphosulfate (APS) kinase 4
Curator Summary: Provides activated sulfate for the sulfation of secondary metabolites, including the glucosinolates. Redundant with APK3.
Computational Description: adenosine-5'-phosphosulfate (APS) kinase 4 (APK4); FUNCTIONS IN: kinase activity, transferase activity, transferring phosphorus-containing groups, ATP binding; INVOLVED IN: male gamete generation, sulfate assimilation; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Adenylylsulphate kinase, C-terminal (InterPro:IPR002891); BEST Arabidopsis thaliana protein match is: APS kinase (TAIR:AT2G14750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G67560.1

Model type: Protein coding
Short Description: ADP-ribosylation factor-like A1D
Curator Summary: A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.
Computational Description: ADP-ribosylation factor-like A1D (ARLA1D); FUNCTIONS IN: GTP binding; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1C (TAIR:AT3G49870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR