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11-6309-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1280316 [Map]; Strand: c
      • AT1G04610.1 - [+] show detail - YUCCA 3
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-6309-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCATA TTGCTCTGTT TTAGGGGCTA TAAAGATTTG 
    AACTTTTGGT ACTTTTTTTT TTTTTTNGGG NNAAAAANTT NGGGNCNTAN 
    NNNCCCCNAA AANANCCNTG GGGGGGNNGC CCCCGGNNNG GAAAAAANNN 
    AAAAAAANTC CCNNCCNGGG NTTCCNNNNC CCCCCCCCNA AACCNTTTTC 
    CCNNGGGCCC CNCCCCCNGG TTTNNNNGCC CCCCCNGGGG AAAAANNCCC 
    CCCAAAAACC CNNAAANCCT NAAAAACCNG NNNAANTTTT TNANGGNTTN 
    NNCCCNGNGC CCCCCNAAAC CCTTNNGNTT TTTNCCCAAA CCCCCAAAAA 
    NCCNNCCNNC CCCTNNTNNA AANGGGNTTA ACCCCCCCNN NCCCNAANGN 
    NTTNNNNNTT TTNNGGGGCN GGNCCGGNCN NNNNAAANTN GGGGGGNNGG 
    CAAAAGGGGG CNGNGGGGNN CCNNGGGNCC NNAAAANCCN AAANCNGGGG 
    GGGGCCCCNN GGAANCCCCC CNGGNAANGN AAANNGGGNN NTCNGNNAAA 
    NNNNTTNNGG NAAAGGGNTT TNNAAACANC CNGGGGTNNN TTTTNCCCAA 
    AAAAAANAAN GNCNNNNNCC CCCCCAAAGN ATTNNAAAGG GNCCCCCTTC 
    NGNNTTAAGC CCNGNGNNNN CGNTNAANNN NGGGGGGCCC CCCCCAAAAA 
    AAAGGGGNCN TTNACCN

AT1G04610.1

Model type
Protein coding
Short Description
YUCCA 3
Computational Description
YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink).
Link
InterPro Scan - TAIR