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11-6319-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3102068 [Map]; Strand: w
      • AT3G10050.1 - [+] show detail - L-O-methylthreonine resistant 1
        Distance: -307; Region: promoter
      • AT3G10060.1 - [+] show detail - FKBP-like peptidyl-prolyl cis-trans isomerase family protein
        Distance: -89; Region: promoter
    Flanking Genome Sequence: 11-6319-1 - 5-prime edge 
    GTGTTGGTGG ATCATTCATC ATCATGTATA TTGGAAAATA AAAACTGATC 
    TTTTCTAAGT TTTAGCAAAA CAAATATTTT TTATTTATAT GGTCTACGAC 
    AAGAAGTTTG GTGGTGACCT TGAGAGAATC ATGAAATCTA CAACTTGTGG 
    ATGAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3101952 [Map]; Strand: w
      • AT3G10050.1 - [+] show detail - L-O-methylthreonine resistant 1
        Distance: -191; Region: promoter
      • AT3G10060.1 - [+] show detail - FKBP-like peptidyl-prolyl cis-trans isomerase family protein
        Distance: -205; Region: promoter
    Flanking Genome Sequence: 11-6319-1 - 3-prime edge 
    ACCAACACCA AGTGCGTCCA TAATCGTTAT TAATTAATCT GCAATACATT 
    AGGGCTAATC ACGGAATAAT AGTTTTTTGT GTTGGGTTTG TAATTTATGT 
    GTCCGGTGAA ACCTAAATAC AGACAAAAAA AGTGCTTGGT TAGTGTTTGG 
    TGAGAATCGG TAATAAAAGG TTTAAAAAAC CAAACCGGTC ACGTAGTTTT 
    GTTTGTTGTG TTTATTAAGA GCCGCCACCA GCTTCTTCCT CTCTGTTTAA 
    CTCTCTCTAA ACCCATGAAT T

AT3G10050.1

Model type
Protein coding
Short Description
L-O-methylthreonine resistant 1
Curator Summary
first enzyme in the biosynthetic pathway of isoleucine
Computational Description
L-O-methylthreonine resistant 1 (OMR1); FUNCTIONS IN: L-threonine ammonia-lyase activity; INVOLVED IN: isoleucine biosynthetic process, threonine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Threonine dehydratase I (InterPro:IPR005787), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Threonine dehydratase, C-terminal (InterPro:IPR001721), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: serine racemase (TAIR:AT4G11640.1); Has 26917 Blast hits to 26860 proteins in 2759 species: Archae - 692; Bacteria - 18712; Metazoa - 552; Fungi - 889; Plants - 577; Viruses - 2; Other Eukaryotes - 5493 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10060.1

Model type
Protein coding
Short Description
FKBP-like peptidyl-prolyl cis-trans isomerase family protein
Computational Description
FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G20810.1); Has 8406 Blast hits to 7908 proteins in 1571 species: Archae - 44; Bacteria - 4267; Metazoa - 1616; Fungi - 433; Plants - 872; Viruses - 0; Other Eukaryotes - 1174 (source: NCBI BLink).
Link
InterPro Scan - TAIR