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11-6322-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 171764 [Map]; Strand: c
      • AT4G00390.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6322-1 - 5-prime edge
    ATTGCTGGTT CGGGTATTGA TGAGTATTAT GTGAGGCAGA AATGGAGTTC 
    GTTTACTCTT GAGACTAAGA AGATTGTTGA AGAGAAGTTT CAGTTGATGC
    AAGCTAAAGA GCTTGAGGCT ATGTTGGAGA AGAGTGTGCG TTTGACTGAC
    CTTACGTCTT ACTTCGTTGA TGCTTCGAAG AACTAGAGCT ATTAGTTACT
    TAGATTTGTC GGTTTTTTGT ATCGGAATGC TATGCATAAT GCTTTCTTTT
    GTTTTTCGGA TTTAGGATTT GATTCTTTCT GGTTTGTTTT TTTGGGGTTG
    AAAGATTCTC TACCTTATAA TATTTATTTT TTTATTCGTC AACTTGTCCT
    TATTATACCT CATCTTTGTC TTTTAAAAGT TCTTGTACCA ACTCCAANAA
    CGAATCTATG TTCCTGACAA AACCGCCTTG TNNCATTGTT AGGTAAAGCT
    ACCANCCCGG GCCGCNACCA CCCCGCCCC
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 171886 [Map]; Strand: c
      • AT4G00390.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6322-1 - 3-prime edge
    ATCATCCTAG CAAGAGACGA CTTCTCAAAC CAATCATCTC CATTAGTTGA 
    AGAAACACCA ACAAACGCCA AGTCTTGCTT TACAGAATCA AGCT

AT4G00390.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; LOCATED IN: nucleolus; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT1G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR