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11-6325-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10133970 [Map]; Strand: w
      • AT1G29030.1 - [+] show detail - Apoptosis inhibitory protein 5 (API5)
        Distance: -9; Region: promoter
      • AT1G29040.1 - [+] show detail - unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant str...
        Distance: -99; Region: promoter
      • AT1G29040.2 - [+] show detail - unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant str...
        Distance: -99; Region: promoter
      • AT1G29040.3 - [+] show detail - unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant str...
        Distance: -99; Region: promoter
      • AT1G29040.4 - [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein C...
        Distance: -99; Region: promoter
    Flanking Genome Sequence: 11-6325-1 - 3-prime edge 
    NANAANNNNA CTGNNNNAAN TACTGGGCCT NGNNGNTGCT CGNCTNTNNN 
    NCCATNAACC CAGAAACCCT TGGAGTCTTG GACTGCTCTG CGAGAGAACA 
    TATCAACCTT CTACACTCTT CCAAAATCGC CATGTACCGG TCTCATCTTC 
    TTTTTCTCCT TCTTTCACTT CTTCGTCTTT CTCCCGAAGT TTTTTTCATT 
    ATTGTGTACA GAGACGTGAA TACATGTGTA TAGATTCTGT TTCCTGCAAC 
    CTAAACTGTG TATATTAGTA TAAATACTCA TTTTCTTAGA TTTTCTCCGT 
    CTCAGCTTTA TCTAAAGCTC CCCGAAATGT CAGAACAGTA TTCCGAAGAT 
    GCTAAACATA TCGAGAAGCT

AT1G29030.1

Model type
Protein coding
Short Description
Apoptosis inhibitory protein 5 (API5)
Computational Description
Apoptosis inhibitory protein 5 (API5); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Apoptosis inhibitory protein 5 (API5) (TAIR:AT2G34040.1); Has 834 Blast hits to 647 proteins in 164 species: Archae - 2; Bacteria - 50; Metazoa - 244; Fungi - 88; Plants - 132; Viruses - 7; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G29040.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 344 Blast hits to 344 proteins in 122 species: Archae - 2; Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G29040.2

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 190 Blast hits to 190 proteins in 92 species: Archae - 2; Bacteria - 141; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G29040.3

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G29040.4

Model type
Protein coding
Computational Description
unknown protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 344 Blast hits to 344 proteins in 122 species: Archae - 2; Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
Link
InterPro Scan - TAIR