Home
Mutant Lines
11-6326-1

11-6326-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 18070478 [Map]; Strand: w
- AT4G38670.3 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT4G38670.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT4G38670.2 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTGT ATGCTCGTGG GCACGCATGC TTAAAGAAGA GCGAGTAAAC 
CGAAGGCTGA CACGTGTCCG GCGTGGCGTA CGCATCGCTG CAGCAATACC 
TTGGGTCTCC GAATGCCTCG CACGCGCTAC GGCAAGCAAC ACCGTTCCCA 
TTCCCACGCG TCACCAGCTT TAGGTCTCTG GGACACGCGC CGTTCAAGTC 
CACGAGACAC CCGGTGGCTC CGCATCCTCC AATGACGATT TTCTTGGGCA 
AGATTAGCAT CGGGAGATTG TAACCGTCGA CGAGGCTAAC GTCGTAAAAA 
TCTAGTCCTC CTGTGCCATT GAGAGTAAAC TCGGCGAGAG TTGCTGGAGG 
TTTAGCTCCG GAGCCTGAAC ATTCGACTTT TCCCGAGCCG CAATCTCCGG 
TTAAGCAGAC GAAAGAACCT GAACTCCGAT CTTGTGAACA CAAGGTTCGT 
GCCCAGAGAC GACCGGACCA CGACTCTGGT ATTGCGACGG TTTTAGATTT 
TCCTCTAGAG AGACGAAAGC CAGTTGTGGG GAGCGGCGCA GAGTTAGCAC 
CAGAGAGCAA ACCGGGCCAT ATCGTGTTCC GGCAACGATT CGTGATCTTG 
AACGAAATTG GCTCAACTGC TGCCATGTGA AACCAATTCA ATCAAAATCG 
TGTAAAGATT GTTAAACTCG ATAGTCAAGC AATAAAGAAG CAAGGAATTA 
GACAGCG

3 prime edge [+] show sequence

Chromosome: 4; Position: 18070412 [Map]; Strand: w
- AT4G38670.3 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT4G38670.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT4G38670.2 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)

AGCTACGCCT ATGACGATAA GACGAGCACT TACACTTGCG CCACCGGAGC 
CGATTACTTC ATCATCTTCT GTCCGCCACC GTATACAAGG TGAGATATTG 
ACCGTTTTGC CCCTCTGTTC GCTTTGGAAT ATGCTAGGGA TGTTTCTTGT 
TATTTAGTAT ATGAGCAGGA ATCTAATCTG AGCCACACTG TTGATTATAT 
GGAATTTAGC TAACTTAGTT ACTCGTTATG ATTTGTAGTC TTTTAGATCA 
TATGATCATC TTCTATAAGC ATTTGATTAA GATTGTAGTG TCTACTAGAA 
GCATTTGGTA TGATTATAAA TGATTGTAAA GGTCTACTAT AAGCATTTGG 
TATGAGAAAG TAGTGTTGAT TAAAAGGGTT TTGTTTTAAT GGTTGGAAAA 
GCGGGTAGCA ACAGTTGGAT TGAGTTCGAC AAATATAGAT TGAAGTGCTC 
CATTGNTATA AATGTACTTA NGTGTAATGA GCTTANTAAG TTGTTGACTA 
TGAGTTTTGT TTTGCANNNA GAANCTCCAN NCCNGGNCNN NNA

AT4G38670.1

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 1594 Blast hits to 1578 proteins in 180 species: Archae - 0; Bacteria - 39; Metazoa - 54; Fungi - 72; Plants - 1416; Viruses - 2; Other Eukaryotes - 11 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38670.2

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 1592 Blast hits to 1576 proteins in 180 species: Archae - 0; Bacteria - 39; Metazoa - 55; Fungi - 72; Plants - 1413; Viruses - 2; Other Eukaryotes - 11 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38670.3

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR