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11-6333-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19202871 [Map]; Strand: c
      • AT2G46730.1 - [+] show detail - pseudogene, similar to 68 kDa protein, blastp match of 68% identity and 4.7e-...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-6333-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA CTGCACCATT CACTTTCCCT TTAAGATCTA 
    TGGACCACAG GGAAGTATCA TGGCTAGAAC TCATTCTTCC ATATCTGTCC 
    TCTGGTTTAA GACTCATCTC CCTTTTGACA CCGTATCTAT CCACAAGCGT 
    TATCTTCCTC ACTTTCTCGA CACCATCCGC CATCAGAATT GTCCCCGGTA 
    GTAGGCTGCC CATAAAGAAC TCGAAAACAT TACAAACTCC GACAACAATG 
    TTGAAACATT GATGAACACT TACTTACCAG TTTATACTTG TTGAGATTGT 
    ATGGTGTGAG AGTTAGTGTC AAGAATCTGT TTTGGCTCGT TTTAGAAGAA 
    GAACACAGCT GGAGAACAGG TGTTGCATCG GTTCATACCG AATCTCATAG 
    CAGCTTGGTC CAAAAGAAGT GACAATGAAC AACAAATCTC CATCATGTCT 
    GAAAACAACT ACGTCGCCGA CTCGGCTGGT GGGGAGCTTT AGCCAGCCTT 
    GGATGAGTCT TCGTCCCTCC ATCTTCACTT CCCAGATTAT ATCAGAAGCG 
    TTTGATCTCA GTTTCACCAC CACATTGCTC TCATTTGTTG TTCCATCTAT 
    GTGCCTGAGA AGAAATCCAT GGGAATGTGA TAAGAGAGAA CAACTCTGAA 
    CTTATCAGAA TGTTCTGCAA AAAAAGAAAT CCNNAGAGAG ATGAAACAAA 
    CCAAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19243199 [Map]; Strand: c
      • AT2G46820.2 - [+] show detail - photosystem I P subunit
        Distance: -297; Region: promoter
      • AT2G46820.1 - [+] show detail - photosystem I P subunit
        Distance: -390; Region: promoter
    Flanking Genome Sequence: 11-6333-1 - 3-prime edge 
    AAATGAAAAC GGTAGNAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAG 
    ACTAAAAGCC CATATGTGTT TCTCATCATA ATGGAAGGCC TACAAGTAGA 
    AGAATT

AT2G46730.1

Model type
Pseudogene
Computational Description
pseudogene, similar to 68 kDa protein, blastp match of 68% identity and 4.7e-17 P-value to GP|7271113|emb|CAB81547.1||AJ276420 68 kDa protein {Cicer arietinum}
Link
InterPro Scan - TAIR

AT2G46820.1

Model type
Protein coding
Short Description
photosystem I P subunit
Curator Summary
Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.
Computational Description
photosystem I P subunit (PSI-P); FUNCTIONS IN: DNA binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52220.1); Has 450 Blast hits to 450 proteins in 73 species: Archae - 0; Bacteria - 149; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G46820.2

Model type
Protein coding
Short Description
photosystem I P subunit
Curator Summary
Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.
Computational Description
photosystem I P subunit (PSI-P); FUNCTIONS IN: DNA binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR