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11-6340-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1244254 [Map]; Strand: c
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: -693; Region: promoter
    Flanking Genome Sequence: 11-6340-1 - 5-prime edge 
    GTCGTAACCG CATGGCTGTT TTCACATTTG TTTCTAAGAA GTAAGAACAA 
    ACCGATAATT TACATGTTTT TTTTTTTTTG GNAAAANNNA AANAAANTTT 
    TNNNAAAAAA AAAANCCGGN NCCGGNCCNN ANGGGGNANA NCNGAAACNT 
    NNNCCNNCCC NGNCCCCCAA ANNTTTNNAN AAGGGGNTTT TGNNNAANTG 
    NCCNAAANCC NAGGGGGGNT AAAAAANNTN NGGGNNAAAN AANNANNCCC 
    TTTTTTTTTT TTTCCNGGGG NTNNNAAGGG NTCCNANNNT TTNGGNCNNN 
    NGGGGGGNTT TNNNNNAAAA AAAAAAANTT TTTTTNNNNA AACTNAAANG 
    GGCAAAAATT TTNNNAANTT TNAAAAAANA AGGNNCNTTT NNAAAAANTT 
    TNGGGGGGNN AAAAAAACCC CCCGGGNTTT TTAAAAAACC CGGGGGGGGG 
    GGGGGCCCTT TTNCCGTTTN GCCANTTTTN CNNNGGNNNN NGGGAAAAAA 
    AAAAANTNNG GGANNAANAA AANCCNNNNG GNANNNNNNN G

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR