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11-6375-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 87941 [Map]; Strand: c
      • AT4G00210.1 - [+] show detail - LOB domain-containing protein 31
        Distance: -1046; Region: intergenic
      • AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
        Distance: -2095; Region: intergenic
    Flanking Genome Sequence: 11-6375-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAAT CAGTGTCATG TCTGTTTCTG ACTATACGAT 
    TTGTAGAAAC AAGAAGCAAC ATACATCTCG ATTTTCTCTC TATAATTCTA 
    TCACGAAAGC TGTCCATAGA GAACTAGTTT GACAAAAAAT TATATACAGT 
    ATATAACATA TATAAAAGAA TTACACACGT GTGGTGAGGG ATCGCACGTG 
    TGTGTGACAG GGAAACCTGC GGCTGAGTGG TGAGAGAGAA ATACGTCAGC 
    AAGCAGCTAA TTGTGTTTTG CTTCACGCAA AGCATTTGTG TTTGTTTGTC 
    CTTTGTATAT ATCACAAATC TGCTCTGCCG TTGCTTCCAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 87951 [Map]; Strand: c
      • AT4G00210.1 - [+] show detail - LOB domain-containing protein 31
        Distance: -1056; Region: intergenic
      • AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
        Distance: -2085; Region: intergenic
    Flanking Genome Sequence: 11-6375-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    GTTTGCTTCC CCCGCAAGTA CAACCTCAGT CAGTCAGTTA CTGTCATGTC 
    TCTCTTTCTC TCTGTTTGAC AAGATCCCTG ACCCTTGTTC ACTTCCCTAA 
    TTTAAAGCCT TCTCCTTAAT GGGCCGGGCC TTGTATCTGT TTCGGATC

AT4G00210.1

Model type
Protein coding
Short Description
LOB domain-containing protein 31
Computational Description
LOB domain-containing protein 31 (LBD31); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 19 (TAIR:AT2G45410.1); Has 416 Blast hits to 414 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00220.1

Model type
Protein coding
Short Description
Lateral organ boundaries (LOB) domain family protein
Curator Summary
Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.
Computational Description
JAGGED LATERAL ORGANS (JLO); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 18 (TAIR:AT2G45420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR