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11-6386-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22200032 [Map]; Strand: w
      • AT3G60110.1 - [+] show detail - DNA-binding bromodomain-containing protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-6386-1 - 5-prime edge 
    CACAAGGTTT TTCGTTGAAG AAATTTGTTT TTTTCGACTC ATTTACCATT 
    TTGATCACCC AACACTGGAC ACCTGGCAGC TTCCGGTTGA ATCGTGGTTT 
    TGTCGTGTCT TTCAAGATAT GGTCAACTTA TTGACTTTTC AGCCGCCTTT 
    AAGCGAGACA AGTTTTTGGG CTTTAGTTGG GCTTCTAGAA ATCCATTACT 
    TATGACGTTT TTATGGTGGT CTCATACTTT CTCATCTCTG TCATCTCGCA 
    GGACACTAAG GATTACAAGA GGTTGATAAG GCAGCATTTG GACATGAAGA 
    CAATAGAGAA GAAGATGGAG AAAGGATCTT ATGTTTCTTC AAGCCTCTCT 
    TTTTACAGAG ACCTCAAGCT

AT3G60110.1

Model type
Protein coding
Short Description
DNA-binding bromodomain-containing protein
Computational Description
DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT2G44430.1); Has 40209 Blast hits to 25016 proteins in 1620 species: Archae - 68; Bacteria - 5263; Metazoa - 15621; Fungi - 3406; Plants - 1675; Viruses - 190; Other Eukaryotes - 13986 (source: NCBI BLink).
Link
InterPro Scan - TAIR