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11-6463-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 68130 [Map]; Strand: c
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: 2651; Region: intergenic
      • AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 1143; Region: intergenic
    Flanking Genome Sequence: 11-6463-1 - 5-prime edge
    GATTGAGTAG GGTTGGGTGT GTTGCTTGTG ATGAAGGGTG CCTTGAGACG 
    AGAGAAAAGA ACATGTTTTC ACCACTTTAC TTACTTCACC CTCACGAAGT
    TAACACACAC ATATATATTA TTCCAACATA CCTAATATTA TATTAATATA
    TCATGAAACT TGAAAATGTG TTGGTGTATT TGTATGTCAT CCATTTTTTT
    TTTNTAATTN AANGTNAAAA TTNATTAAAA AANCGTNTTT NCAAATCANT
    CCAANCNTTT TAAANCAGNC NAAAAAAAAA TNTTATNTTN TNTNTNGGCT
    NGCAAACCTA NCTNGGATNC CNCTCNCNTN CTTNAANGCT CCNCCNCTTT
    NGATCGNNCA AACCAAGCTA CCANCCCGGN CCGTNAACCN CCCNNGCCCC
    TNNAA
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 68246 [Map]; Strand: c
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: 2767; Region: intergenic
      • AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 1027; Region: intergenic
    Flanking Genome Sequence: 11-6463-1 - 3-prime edge
    ACTCAATCGG ATAGTTAGGA GAAAATTTAC ATTATTATAC AACCTTTATA 
    AAATGAAGAA GATTTCAGCT AATTTGTTCT CCTAAATCGG GGTTTGTATG
    ATGAACAGAA TCGTGCTTTG CCATAATTAG AGGAAGAAAC AAAAAAGTCA
    GCTAAATATA TTAATCTTGT CAAACAATAA TTTATATTGA AGGATGACGT
    GTTAGAGTTT GTATGCATGT AACCATATAT AAATGATTGC GTCGTTCATT
    TTGTATTAGA TTTTAGGATA ATGATTAGTT AGATTAGACA AAAATTGATC
    AATTATTATT AGGAGATCAC ATGGGACTGA TAAGGATAAA GAAAAACAGA
    GAAGATTTCT TCATCTCATT AGAGCCAAAG TAATAATAAT TATGATTAAA
    AAAACCAACC AAGATCGGCG GGAAGTAATT AACAATTACC ACAATATAAA
    GTTGGTAAAG GAATTTTCGT ATTTCTTAAA TCATATACAT TTCTTTAAAC
    ATAATTTAAC TCTCATTTGA TCATTGACAA CACATTATTA TGATAGTTTT
    GCTCGTGGCA ACTAGGATGA GAATT

AT4G00160.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00165.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR