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11-6466-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 137401 [Map]; Strand: c
      • AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon1 (CDS)
      • AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon1 (CDS)
      • AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6466-1 - 5-prime edge
    CAGACACGGC GACGATCCTT TCTACACTTC CGCAAAAACT CGCAGGGCCA 
    ATCAGCGCAT CGATCAGCTC CGTAGAGCTC AGAGCAGACG TCTCTAACGT
    TCCATCATCA GCTCCTTCTC CGCATAAACA ACAACTCGAG CCGTCCGATT
    TATCTTCCAG TAATCTAGAT CGGTTTTTAG AGTCGGTCAC ACCATCCGTA
    CCGGCTCAGT TTTTATCCAA GGTTTATTAC AATCTCTATT TCTATGGGGT
    TTTTTTTTTA AATCNAAGNC GGGGTGGTNC TNNGAGGGGG AGGGGGANAA
    TCTNNGGGNA AACNTNGNTC CNAAAAAAAA AANCANANGA NGATTNTAAN
    AANCTGGGNC CTNNTTTNGG GCTGGGGGAN NTNGGGGACN CNTTGGCNNA
    GGGGNGGGCT NNCGGCCCNG GGGGGCCTTT NGTTTTNAAN AANAANANGG
    ATNGGGTTNT CNAANANTNG GNCCTTTTTT NGGNANCCNT TNAAATTTNG
    GCTNNTTNTA AGGCCTGGGA TNCNNCTTTN AAATNAAGGN NNTTAATTNT
    TNGGGAACCC TTNTTNGCNC CTTTTTGGNT AANAGGCTNT TTTTNATTNN
    NGTAATGGNA GGGTTCCTAG GGNAGGCGNN CCNGGGGAAN NNGCAANGGG
    GTTTCGGGGA NTTAANNTAN AAATTTANNA NNGAANGGGA TTCCNNNNGG
    GGNT
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 137517 [Map]; Strand: c
      • AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-6466-1 - 3-prime edge
    CGTGTCTGCC TCTCGTCAAC TGAAATCCAG CACCCAACAT CTCCGAGTAG 
    TCGTAGTTGA GTTTTTACCT ATATATCTAT ATATCTATCT AAGCT

AT2G01260.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 265 Blast hits to 263 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR