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11-6510-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3659965 [Map]; Strand: w
      • AT1G10950.1 - [+] show detail - transmembrane nine 1
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-6510-1 - 5-prime edge 
    GTTTTAGCTC AAAATTGTTA TTGCCTTTTG TGATATTGGA GATCATGAGA 
    TCTAGCTTTA ATGCTTTTGC TCCTCTGCCT TCTTACGCTC GCAAGTAGTG 
    TGACATTTAA AGTCGATTCC AACTATATAT TTTCTGCGTG AAAGATGATA 
    GATAAAGGCG GGTTATGCAT TATTCAAGAG CAATCTGGTA GCATTATTCA 
    AGAGCCATTA TTTCTATGGA ACCATCATTT GTGTGAAGAC TTTAACTCCT 
    GATTTTTGAA ATGATATTGA ACGTAGCCTT TATCAGTATC TGTCTGTCTA 
    CGTTTGACAT TTTGTTCTGT TCTCTCTAAT GGAATTTTGG TTCTTACTCT 
    CTCTTACTAG TTAATCCCAT AAACTTTTAC ATTTCTGTGC TTTTCTGTCA 
    AGTCAATTTT TTTTGCCTTC ACCTTTTTCA GTATCAAGCC GAGGAGCAGG 
    TCACCCTATG GGTAAACAAA GTTGGCCCAT ATAACAATCC CANGAAACAT 
    ACAACTATTA CAGNCTTCCA TTTTGCCGCC CATCTGGAAA CAATGTTCAC 
    AAATGGGGTG GNCTTGGNGA ANTTNTANGN GGAAATGANC TGATTGACNN 
    NGANATNGNN ATAAAATNCN NGANNNCNNN NNANNNNTTA T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3659849 [Map]; Strand: w
      • AT1G10950.1 - [+] show detail - transmembrane nine 1
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-6510-1 - 3-prime edge 
    GCTAAAACTG ACCATCAGCA AAAGAAGCCA TGTGTGACAC TTTCAGTATC 
    ACATTTTAGA TACCAATTGA AAAAAATCAT CAACCCGACC TCGGAACTAT 
    AAGATCTACA TCTCGAAGAT GCTAATACAT TAAATGCCAC TCAATTACAA 
    CACAACTCAG TGTTGATCCA AGTATTTGAA CATCAAACAG GCTACCACGT 
    GCAGAAATCA ACGAGAATCT CAAACCAACA TCAAAATTTC TTATTAAAAT 
    CGAGATTGTG AAAAGCCTAA ATCACAATGA ATAGACAAAA TACGCCTAGA 
    CTTGCAACGA AAAGATACGC CTAAATCACA ATGAATAGAA GCTCGAGGAT 
    C

AT1G10950.1

Model type
Protein coding
Short Description
transmembrane nine 1
Curator Summary
Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.
Computational Description
transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink).
Link
InterPro Scan - TAIR