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Mutant Lines
11-6517-1

11-6517-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 19607250 [Map]; Strand: c
- AT2G47890.1 - [+] show detail - B-box type zinc finger protein with CCT domain
  Distance: -746; Region: promoter
- AT2G47890.2 - [+] show detail - B-box type zinc finger protein with CCT domain
  Distance: -746; Region: promoter

CTAATAACAT GATCTCGACA ACTACTGGCC TACTTCTCTT GAACAATAAC 
ACATATCACA AGATAATCTA GCTAGGGTTG CTTTTCCATC CTCGTAACAT 
ACTAACATGG CTATAAAAAC TCATTTTTCA ACAATCGAAA TTGATTCTGA 
AGCCTTTAAT AAAAATACAC ACAACTAAAC TGAAACCAAA TGTTCTACCA 
TTTCACTTTG GTGGACTAAA CTATTCGCAT GAGCTTCGTT CCTTTTTTAA 
TTTTTGATTT TTTAAAAAAT GGTCCACTTT CCAAGTAATC ATCGGTTCTC 
NATATTTTNT NGGATACAAA TCTNGANCCT ATAGGNGGAT GCTTTTTTCA 
CNCNCCGGNC AAANAATCTN GAATCTTATA NCANNGACAA CAAAGGGAAT 
ATGGTTCTTA GTTCTNACAC GTTCTGTNCA ACTTCCAATT AAATTCTCCT 
ATNTNTTTCC CACNATCCCA ANAAGTNGGA GGTCAANAAA AGTNGTTCCA 
CACNTNANGT AAAGGGATNC TACCTTNATN ATTTCTTTTC NACCTTTNGA 
ACTCAGTATA ATCATATTTT NTTCAAAAAN AANTCTTCAA GGTCTATATA 
CTACTATATA ACTATAGAGG CTTTTACACN CTNCTTTTNA TNGGANAATC 
TTGAAGTAGT TGATTTTGGT ACCTTTAAGT AACT

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 19607363 [Map]; Strand: c
  - AT2G47890.1 - [+] show detail - B-box type zinc finger protein with CCT domain
    Distance: -633; Region: promoter
  - AT2G47890.2 - [+] show detail - B-box type zinc finger protein with CCT domain
    Distance: -633; Region: promoter
Flanking Genome Sequence: 11-6517-1 - 3-prime edge
```
GTACTTATTA GTGTCGCTGG AATGTTAGAT ATTGCCCATC CTGTCTCTTT 
TTTTCCATCG TGCCCTAAAA GTCAAACTAT GTATGGTATT AGCTAATCTT 
GAATAGGTTT AATTCAGTAC GGGTTGAGAT AACTCTAATT GAAAACTACC 
TTCATGGAGT AATAGTTATC GAGGAACGAT GATGAGGTAT TAGTGGAGAT 
AAGCAGATTT GGACTCAATA TCAAAAATTA ATGGTGGGAT C
```

AT2G47890.1

Model type: Protein coding
Short Description: B-box type zinc finger protein with CCT domain
Computational Description: B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 3246 Blast hits to 2264 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3153; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47890.2

Model type: Protein coding
Short Description: B-box type zinc finger protein with CCT domain
Computational Description: B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR