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11-6536-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4635089 [Map]; Strand: c
      • AT1G13530.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6536-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC CCATCGGAGC TTACTTTCCT TCCAACGGAA 
    GGTCCAAACT CCGGCGTATT GGTGATTCAA GACGAAGAAT CACAGCCTAC 
    ATGCTGTTTT GGCAAATGCT TTGGTTGTGA TCTCAATGGT TTGCCGTTTC 
    CTCAGAACAC AAGAGTCACC GTTAAATACC AAATCGGACG TTAGTTACTA 
    GTCATTTCAC TCCTAACTTT CTGTCAATCA TTTTACTTTA CTCTGTTTCT 
    GTTTCTTCTC TGTTTATTAT CTAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4635096 [Map]; Strand: c
      • AT1G13530.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6536-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TCTCTGGTAC TCGGACAAAC GCTTTGTTAC ATACATCTCT CCTTGATTCT 
    TTGTTACTCA AGATCTAACC TGTCATCGTT TATATAAAAC AAAGGATCAT 
    AAGAACGTGC AAGGAAGTTT ACTAAGCTAT TGTTTATAAA TATAATCTGA 
    GGTTTGACTT AAACATTTGT CAGAATCTCC TGTGGATGAG TACTAACAAG 
    TAAGAAGACA AACAAACTCT ATATTTTATT CTTTCTTCAC CCAAAAAGAT 
    TGAAGATAAT ATCAAAACAC AATACACGGA AAAAACCGAA TTGAAAATGG 
    CTATAGATAA ATCACACTGA CCAATGGATT CATGTCATTG AGATTGAGAA 
    AGTTTTTGCA GATTTGGTTG CGTGATAAGC T

AT1G13530.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1262)
Computational Description
Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13500.1); Has 101 Blast hits to 94 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR