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11-6582-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1558070 [Map]; Strand: w
      • AT1G05330.1 - [+] show detail - unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bac...
        Distance: -100; Region: promoter
    Flanking Genome Sequence: 11-6582-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTAT ATATAATAGA CACAGTAGAC ACCTCAATTT 
    CACAATTCAC ACCACACACG CAAACAAATC ACAGCTCTCT GTTTTATTTC 
    TTTCTGAAAG TAAAACTAAC CATGGCTGAT CACAACAACA CTCCTCCCTT 
    TGACCTAACG AAACTCGACC ATTACATCAA ATACCAACCA CGAGAAGAAG 
    CTGAAGATTT TTTTGTTCAT GTCGAGGTCA AGGTTCTCGG AAAAGGATCT 
    TCTCCGTTAG AGATCTCCTT CTCAACTTCG GTCTATGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1536588 [Map]; Strand: w
      • AT1G05280.1 - [+] show detail - Protein of unknown function (DUF604)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-6582-1 - 3-prime edge 
    TATTCAACAC CTCCTCAGAA GAAGTAAGAT GGTACGTATT TGGAGACGAC 
    GACACGATTT TCATTCCTGA AAACCTCGCT CGAACTCTCT CCAAATACGA 
    CCACACATCA TGGTATTACA TAGGATC

AT1G05280.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF604)
Computational Description
Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G15240.1); Has 523 Blast hits to 513 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 61; Fungi - 172; Plants - 273; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05330.1

Model type
Protein coding
Computational Description
unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR