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11-6583-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 477087 [Map]; Strand: c
      • AT2G02010.1 - [+] show detail - glutamate decarboxylase 4
        Distance: -493; Region: promoter
    Flanking Genome Sequence: 11-6583-1 - 5-prime edge 
    GGTCAGACCA TGGGTTTGAT GTTTATTTGA ATTTTTATAC TTTAGAGATG 
    GTAATATGAG ATCTTACAAC AAAAAGTCAA TGTCCTTTAG TGGTGATACC 
    AATATAAGTT CGAATTTGGT TTCTAGCNTT ATTGGTATAA ATTCCATTGA 
    CAGCAAAAAG GAATCACGAA AACAATATAA TCTAGTACTA TATTCACATT 
    TTACGCGTAA CGCGTTTGTA ATATTCACAT AATTATGTAA GTGTGAAATT 
    GATCAAATCG CGGGAGATGC TAAATAAACA AAATCAAAAT CACTAATAAA 
    ATGTTCACGA TAACTTAGAA AGATCCAATA AAAAGATGAC GGTCGGAATT 
    TGTATACGAT AGTAATAAAA GTATTCGTGT TTCTAAAAGT TAGTAATTCA 
    TTGGTCTAAA TATTATAATG AGGAAAAGTC ATTGGTAAGG AAAAGGTTTG 
    AAAAAGGAGC ACATAAATAA GGACCAGCGA TGCTTCCTTT CACGATGCAA 
    AACACGAAAT GAAGAGACAC ATTCTCTCTA CTATATATAC CATTTGCTCC 
    TCTTCCTCTA ATTCCACACA TTCTTCTTCA ACTACAAAAC AAAAACACTA 
    CTACACATTC TTTCCTCTTG TTCATTTCAA ACCCAAAAAT CAAAGTTCGA 
    AGTTGGAAAG AAGACATGGT TTTGGCCTAA NACAGTTTCC GAATCT

AT2G02010.1

Model type
Protein coding
Short Description
glutamate decarboxylase 4
Computational Description
glutamate decarboxylase 4 (GAD4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 3 (TAIR:AT2G02000.1); Has 2849 Blast hits to 2845 proteins in 876 species: Archae - 190; Bacteria - 1701; Metazoa - 147; Fungi - 354; Plants - 286; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink).
Link
InterPro Scan - TAIR