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11-6616-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23420478 [Map]; Strand: c
      • AT3G63430.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6616-1 - 5-prime edge 
    GAAAGAGAGA TAGACAAGTT ACCGGAGAGG AAGAGAGACG CTTATTAGGA 
    GAGAGGAGAC TGGGGCGATC GAAGATGTTG AAGAAGCCGG CCATGCAACC 
    GCCGATTTGC TTCTCCAGAT CTTTCTCTTT TGCCATTTTC TTCTGTTGGC 
    TGTTGCTGCT GCACACTCTT CTCCCGCTTC TCTGCTTCTT TAAAGCACCC 
    ACTCCCTTAC TCTAGTCTAA AGGATACTCC TCCTAACGTG CTTTTTTTTT 
    TTTTTTAAAA ACCCCTNNNN NNCCTNNGNN TAAAATTCCT TTTTTTTTNT 
    TTTTNGGGGT TTNCCNNNNC NGNNNNTTNN NGNNAAANTT TTNTTTTTGN 
    NNNAAAAAGG GGNAAATTNG GGNCCCNAAA AAAAAANAAA AAAANNNCCC 
    CCCNTTTTTT TTTTTTTTTT TTTNCCCCCC CNGNNNNATT TTTTTTTTTT 
    TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23420594 [Map]; Strand: c
      • AT3G63430.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-6616-1 - 3-prime edge 
    ACTCTTTCCC TCTTCTCCTG TTCCTAGAGG GATGCAATAG AATTGACTTA 
    CCAACAAAAC GACAATGTCT GTGTTTCTCC AGAGCGCTGA ATCTGAATCT 
    GCCTCGGGTA GGACGAATCA GCAGAGTGTG TACTCTACCC CTGAGCTACG 
    CTCTCCTGCG CCGGCTCAAC AAGGATCTTC TTCTTCTTCT TCCTCTAGGC 
    CTTGGAGGTT CTCTAAAGAA GCTCCGAGGC TCTCCCTCGA TAGCAGAGCC 
    GTCGTGGATG CCAAGGGCTG CCTCAAACAC AGACAGATCC GAGCCGATGC 
    GGTTGAGGCT GAGA

AT3G63430.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 135 Blast hits to 119 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 3; Plants - 119; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link
InterPro Scan - TAIR