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11-6619-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23123979 [Map]; Strand: c
      • AT3G62510.1 - [+] show detail - protein disulfide isomerase-related
        Distance: 205; Region: intergenic
      • AT3G62520.1 - [+] show detail - transposable element gene
        Distance: -1145; Region: intergenic
    Flanking Genome Sequence: 11-6619-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAA CAGAGTCCTA TGTAACCACA CAAAACAGAG
    TTTAAATCAA ATTAAGCAAT ATAACCCACG AATCAAGTGA GACAGCAAAA
    TAAGATAAAA TATCTGCAAT CTAGAAATTC AGGAGATTGA TAGATCAAAC
    TACTTAAACA TTGCTAATCC ACAACCACAA ACTAATGTAA TAATGATTGT
    TTTGATTCAG TTTTTGGAAG CT
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23123986 [Map]; Strand: c
      • AT3G62510.1 - [+] show detail - protein disulfide isomerase-related
        Distance: 212; Region: intergenic
      • AT3G62520.1 - [+] show detail - transposable element gene
        Distance: -1138; Region: intergenic
    Flanking Genome Sequence: 11-6619-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    CGCCTGTGTA TAGGAAGAGA GTAATGACGT TGAGTGTACA GAGTTGGAGA
    AGGCTTTCGA GAAAAAATTG TAATTCTTGA ATT

AT3G62510.1

Model type
Protein coding
Short Description
protein disulfide isomerase-related
Computational Description
protein disulfide isomerase-related; BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 215 Blast hits to 215 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 2; Plants - 111; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62520.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
hAT-like transposase family (hobo/Ac/Tam3), has a 1.1e-86 P-value blast match to GB:CAA29005 ORFa of Maize Ac (hAT-element) (Zea mays)
Link
InterPro Scan - TAIR