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11-6731-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23042108 [Map]; Strand: c
      • AT3G62260.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -1538; Region: intergenic
      • AT3G62270.1 - [+] show detail - HCO3- transporter family
        Distance: 176; Region: intergenic
    Flanking Genome Sequence: 11-6731-1 - 5-prime edge 
    TCTTAAACTG TGTTTGTTGC GTCTCGATTT TTATTGTCGG ATCAGAGATT 
    AGATTAAGAC ATTCTCATTG ACCATTTTTC CACGCGTAGG TACAGTAACT 
    TAACCTGATT AAAACCATTC TAGTTTGACT AATATAATGT TTTAAAGATC 
    CTTCGCAGAA TTTAAATACA AAAAAGGGCT AAAAGTTGCA CCTTTTTCTT 
    ATTAATATTA TAGTCGAAAT CTTAAGGCCA ACTATTCCCT TAAAATCCAA 
    CAAGGAAGAA AACCTTACTG AATCCAATGG GCTTAATACT TTCAGACAGT 
    TTAAAGATTT ATGGCTTTCC TCGAAATTAT GATCCATTAA ATGCGTGTCT 
    CCTCATTGAT GATCATCAGC AAATCGTGTG TCATATTATA TTAACCCTAA 
    TCATAATATA TTAATACTAT AACACCAGCA ACATTATGCT GAGTCATACA 
    TATATATGCT AATAAGTACT AGTAGTTGTT AATTTTTATT GGTAAGATAC 
    CATAACACTA GTTTTATATT AGACTTTACA CGAACAAGTT TCAAAATTTT 
    AGCAACGCAT TAGATCTTGA GCATCTTGGT TTCGTCTAAA GAAACATTAT 
    TTAGTTGAAT GTCTTACATA GTAAGACAAA TATTTTTGGG TAATATATAA 
    AAAATGTGAT AATTTTTAAC TTTTAAATTA NCATTTAGGT TAAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23042224 [Map]; Strand: c
      • AT3G62260.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -1654; Region: intergenic
      • AT3G62270.1 - [+] show detail - HCO3- transporter family
        Distance: 60; Region: intergenic
    Flanking Genome Sequence: 11-6731-1 - 3-prime edge 
    GTTTAAGACA ACCACATAAC CAAAAGGCAA AAGCCACTAA CTTTTCTTGT 
    TGTTCTTTAT TTTCATGTTT CCGTTAGATT TTTTCTCTCG AACTTTCTTT 
    TATCGTGAAC AGTCTATATT ATAAGCATGA TGTTTCATGG CTTTATTATT 
    ACATAGTATA ATGTTTTACC GACATTTGAC ATGGTATTTA GAGAGATTTT 
    ACAATGATTC TAAATCAAGA ACAGAAATGC AAACATAATT TTAAACATAG 
    GTAAAAAGAA AAAAAAAACT NAANAANGCA TAANATNCAA CATCAATTAA 
    TTAACTAATT TTAAACNTAA TCTCCTCCGG TTTTATCAAG CCTCCATNAT 
    NGGTAAACTC ATTTNGACNA TNATGANGGG TTTAAAGGAC TCGGCTTTGG 
    ACTATTTTGG CCTTTCCCGG ANAGCCTNGG ACTCATCTCA CCTNTTAAAT 
    CAATCACTCT AGGACTAANC NCTTGAAANA NATTCCNATT TTAAACCGGG 
    GTNGAAGTCG AACTANNAAC TTTAGGACTA CATGNGNGTC TAAACNCTCC 
    NCTGCTTCTN GTAATAAACC TCATCAAAAN TNNCAAAATC NCATGGNTNC 
    NAAANNNANN TNNTCCCATN TAACNTTCCT GCAAAATTCC AAAATGNGGN 
    TAANAANATT TTTTNANGAA GGCTAAAAAN GGNGGATTTT GATNCNAATT 
    NANTAAGGG

AT3G62260.2

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 7565 Blast hits to 7530 proteins in 876 species: Archae - 12; Bacteria - 1215; Metazoa - 1621; Fungi - 781; Plants - 2594; Viruses - 9; Other Eukaryotes - 1333 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62270.1

Model type
Protein coding
Short Description
HCO3- transporter family
Computational Description
HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT2G47160.1); Has 2572 Blast hits to 1412 proteins in 199 species: Archae - 0; Bacteria - 14; Metazoa - 1904; Fungi - 316; Plants - 231; Viruses - 2; Other Eukaryotes - 105 (source: NCBI BLink).
Link
InterPro Scan - TAIR