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11-6796-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4754423 [Map]; Strand: w
      • AT3G14270.1 - [+] show detail - phosphatidylinositol-4-phosphate 5-kinase family protein
        Distance: 0; Region: exon2 (5UTR)
    Flanking Genome Sequence: 11-6796-1 - 5-prime edge 
    GGTCTCTGGA TTGCTTTTGA ATTTGCATGC TGTTGGAGGA TGATAGACCA 
    TCGGTATGTG CTTGAGTTTT CTCGAGGAAG GATGAACCGA TACGAGCCGT 
    CTTATTGATT AATTATATAT ATGTAGTGGA GTGCCTGAAG GAGATATATA 
    TATATATAGT NGCAGTTGGA TATTAGGGTT TTCATTTGTT AGGTGNGAGT 
    NTCTTTTGTT GNTGNTAATT NGGATTCTAN ACTTCCATGA CCATCGTNGC 
    ATGANGGNNG NGANGGTTTT AGATGGGTAC AAGAGATAGT AATAATANGA 
    CATTCTCTGA NANTGNGGGT CTGATNAAAT CCTGGCTCCC CNGGCGATCC 
    GAGCCAGCTA CTGTGTNCAG GGATTTTTGG ATGCCTGATC AGAGCTGNCG 
    TGTNTGNCAC NAGTGNGATT GTCAGTACAC CCTCATCAAT CGTNNGCACC 
    ATTGNCGTCA TTGNGGAGAG AGTTNTTCTG TGGCAAGNGN NNNTGCCAAC 
    TCTATTTNCT TNTGCTCCCA NCGACTTGAG AACTCCTCGN NGAANACTGG 
    GGAGANGAAN CNGTNTNCCG CAAATNNTTG ATNTCGTGCA AGAGNGAGCN 
    AAGGNGATGG GTGGCCCACA CGANNTGAAG ANGATNGGGN GAACTTNANG 
    NNCCNTNNCN CNNGANAANA NNAANCNTTN NTTANCTNNA GANAACNNAN 
    NAN

AT3G14270.1

Model type
Protein coding
Short Description
phosphatidylinositol-4-phosphate 5-kinase family protein
Curator Summary
Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.
Computational Description
FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases (TAIR:AT4G33240.2); Has 8765 Blast hits to 8134 proteins in 458 species: Archae - 587; Bacteria - 13; Metazoa - 3836; Fungi - 1744; Plants - 978; Viruses - 3; Other Eukaryotes - 1604 (source: NCBI BLink).
Link
InterPro Scan - TAIR