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Mutant Lines
11-6843-1

11-6843-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 1291299 [Map]; Strand: w
  - AT1G04630.1 - [+] show detail - GRIM-19 protein
    Distance: -187; Region: promoter
  - AT1G04635.1 - [+] show detail - ribonuclease P family protein / Rpp14 family protein
    Distance: -15; Region: promoter
  - AT1G04640.1 - [+] show detail - lipoyltransferase 2
    Distance: -781; Region: promoter
  - AT1G04640.2 - [+] show detail - lipoyltransferase 2
    Distance: -812; Region: promoter
Flanking Genome Sequence: 11-6843-1 - 5-prime edge
```
GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA GTATCTTTAG CCGCCGACTT GGTATCATCA 
AATCGAGGAG ATTCGAAGAA GCATGGTGGG ATTTAAGAAC AGATACATGT 
TAATGGAAGT TTTTCTGGAT C
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 1291296 [Map]; Strand: w
- AT1G04630.1 - [+] show detail - GRIM-19 protein
  Distance: -184; Region: promoter
- AT1G04635.1 - [+] show detail - ribonuclease P family protein / Rpp14 family protein
  Distance: -18; Region: promoter
- AT1G04640.1 - [+] show detail - lipoyltransferase 2
  Distance: -784; Region: promoter
- AT1G04640.2 - [+] show detail - lipoyltransferase 2
  Distance: -815; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTCTGAACAT GTAGTTAGGG CATTTTATAT GTAAGAAGAA GAAGAAGATA 
ATCACGTGAC TCCACGTGAC TTGCTTACTT ATGGACTTGG GTCTTTGAAC 
ATATCTGAAA TGGGCTTAGT TATAGCCCAT TTCATCTCAT ACGACTCCGT 
GATTTGCTAA CTAATGGGCT TAGTTATATG GTCCTAGCCT AGTTAATCTC 
CAACGTTCCC TTCGTTGTTC ATCGGAATCC CTAGAACACT CGATTTCAGC 
AAAATCAAAT CGGATTCAGT GATCAAAAGT CAATTTGGTC GAGAAGAAAT 
TGAGCGTTGA AGATGACGGA GGCGATGATA AGAAATAAGC CAGGAATGGC 
GAGTGTGAAG GATATGCCGC TGCTTCAGGA TGGTCCGCCA CCGGGTGGGT 
TCGCACCGGT CCGATATGCC CGCCGGATAT CCAATACGGG TCCTAGTGCA 
ATGGCCATGT TCCTTGCCGT TTCTGGTGCC TTTTCTTGGG GAATGTACCA 
GGTCGGCCAG GGAAACAAAA TCCGCAGGTA AGAACGACTT GTAATAGCTC 
GTTCACATTT CAATTTTTCC TCTAAAATTC GAGATCGCCT TGGTAAAATT 
AGTGTTGTGG AGTGATTGAT GACCATAGTA ATGTAGTGAA GAATACATTT 
NGGTTAATAA TTGTTGAAAC TTGAGTATGT TTATCGTANG AATTGGTTAA 
TATTATTAAC CTATGGAAA

AT1G04630.1

Model type: Protein coding
Short Description: GRIM-19 protein
Computational Description: maternal effect embryo arrest 4 (MEE4); CONTAINS InterPro DOMAIN/s: GRIM-19 (InterPro:IPR009346); BEST Arabidopsis thaliana protein match is: GRIM-19 protein (TAIR:AT2G33220.1); Has 332 Blast hits to 332 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 162; Fungi - 83; Plants - 65; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04635.1

Model type: Protein coding
Short Description: ribonuclease P family protein / Rpp14 family protein
Computational Description: EMBRYO DEFECTIVE 1687 (EMB1687); FUNCTIONS IN: ribonuclease activity, ribonuclease P activity; INVOLVED IN: tRNA processing, embryo development ending in seed dormancy; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Ribonuclease P-related (InterPro:IPR002759); Has 266 Blast hits to 266 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 85; Fungi - 108; Plants - 56; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04640.1

Model type: Protein coding
Short Description: lipoyltransferase 2
Curator Summary: Lipoyltransferase, located in mitochondria but not found in chloroplasts
Computational Description: lipoyltransferase 2 (LIP2); CONTAINS InterPro DOMAIN/s: Octanoyltransferase (InterPro:IPR000544), Octanoyltransferase, conserved site (InterPro:IPR020605), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT4G31050.1); Has 5700 Blast hits to 5697 proteins in 1675 species: Archae - 17; Bacteria - 3180; Metazoa - 102; Fungi - 137; Plants - 98; Viruses - 0; Other Eukaryotes - 2166 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04640.2

Model type: Protein coding
Short Description: lipoyltransferase 2
Curator Summary: Lipoyltransferase, located in mitochondria but not found in chloroplasts
Computational Description: lipoyltransferase 2 (LIP2); CONTAINS InterPro DOMAIN/s: Octanoyltransferase (InterPro:IPR000544), Octanoyltransferase, conserved site (InterPro:IPR020605), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT4G31050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR