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11-6868-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1726271 [Map]; Strand: c
      • AT1G05770.1 - [+] show detail - Mannose-binding lectin superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G05780.1 - [+] show detail - Vacuolar ATPase assembly integral membrane protein VMA21-like domain
        Distance: -337; Region: promoter
    Flanking Genome Sequence: 11-6868-1 - 3-prime edge 
    CCCACTGGTC CTATCTTGAT TTTCCCTTCC ATTTTCTTCT TTATGTGTTT 
    TTTTTGTTCC CTCTTACTTT AAGGATAATG CAAGAGTTAA TTTCTTATAA 
    GTCGGTGTTT TTAGGATAAT CTTGTTACAT GATGAGATAT TCCTTGCATA 
    ACTTGTAAAC AATATATATT CCTTACCTTT ATTCCATGTC TATCTATTTA 
    ATAAGTCATA AATTGAAACA TATCAAATAA TCAAACCGTC AAAATTAATT 
    GTAGTACAAA AAAAACCGTT AAAATTAAAC AAAAACCGTC AAAATAATCT 
    TAGTAAAAAA ATACCGTCAA GATTAATGTT TGTACCGTCC CACGAATCGG 
    CTTATACCGC TCTTACAAGC AATCTTATTT AACCCGCCGA GTCTAANACC 
    GANAGTGCAC TCGCTAGATC CAACGCCGGA CTCAATCCAT CCCTTAACCC 
    TGAGCAAGAT C

AT1G05770.1

Model type
Protein coding
Short Description
Mannose-binding lectin superfamily protein
Computational Description
Mannose-binding lectin superfamily protein; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G05760.1); Has 502 Blast hits to 381 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 502; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05780.1

Model type
Protein coding
Short Description
Vacuolar ATPase assembly integral membrane protein VMA21-like domain
Computational Description
Vacuolar ATPase assembly integral membrane protein VMA21-like domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Vacuolar ATPase assembly integral membrane protein VMA21-like domain (InterPro:IPR019013); BEST Arabidopsis thaliana protein match is: Vacuolar ATPase assembly integral membrane protein VMA21-like domain (TAIR:AT2G31710.1); Has 33 Blast hits to 33 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR